Variovorax boronicumulans: CKY39_31800
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Entry
CKY39_31800 CDS
T05068
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKY39_31800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vbo03400
]
CKY39_31800
Enzymes [BR:
vbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKY39_31800
DNA repair and recombination proteins [BR:
vbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CKY39_31800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecG_wedge
RecG_dom3_C
tRNA_anti-codon
ResIII
nSTAND3
AAA_30
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
ATA57300
UniProt:
A0A250DSG0
LinkDB
All DBs
Position
complement(6872699..6874834)
Genome browser
AA seq
711 aa
AA seq
DB search
MPSTLEALSVPAKKEPTPPAAPAQPPGTGLSLVQRALRKLGLVRDIDFALYLPMRYEDET
RIVRLADTRDGDMAQVEGVVTECEVVFRPRRQLIATIDDGSDTCQLRFFNFYPSQQKQLA
VGAKVRVRGEMRGGFVGRQIMHPTVKAAGTALPNALTPVYSTVAGLAQPVLRREVRSGLA
RALLDETIPVQIGLRGAWDLRSALSFLHYPTPDVSIAALEDHSHPAWQRIKAEELLAQQL
SQLQARLERAAQRAPVLPASTDAAASSLHAQLLAVLPFGLTGAQQRVGEEITADLHRQVP
MHRLLQGDVGSGKTVVAALAAARCIDAGFQCALMAPTEILAAQHFGKLVGWLDPLLAERG
LRVAWLTGSQKKKERDEMSAAVESGEAALVIGTHAVISEKVRFKNLALAIIDEQHRFGVA
QRLALRGKAGGDLEPHLLMMSATPIPRTLAMSYYADLDVSTLDELPPGRTPIVTKLVADH
RRDEVIDRIQAQISQGRQVYWVCPLIEESEAVDLRNATETRDELAGTLGEHIQVGLLHSR
MPTAEKQAVMAAFTANEIQVLVSTTVIEVGVDVPNASLMVIEHAERFGLSQLHQLRGRVG
RGAAASACVLLYAPGDSGRVGEAARARLKAMAETGDGFEIARRDLEIRGPGEFLGARQSG
APLLRFADLATDTLLLDWARELAPVMLQKHPELAQRHIDRWLGTKAEYLKA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgccgtccacgctagaagccttgtccgtgcccgccaagaaagaaccgactccccctgcc
gcaccggcgcaaccgcccggcaccggcctgagcctcgtgcagcgcgcgctgcgcaagctc
ggcctcgtgcgcgacatcgacttcgcgctctacctgccgatgcgctacgaggacgagacc
cgcatcgtgcgcctggccgacacgcgcgacggcgacatggcgcaggtcgagggcgtggtc
accgaatgcgaggtggtgttccgaccgcgccgccagctcatcgccaccatcgacgacggc
agcgacacctgccagttgcgcttcttcaacttctatccctcgcagcagaagcaattggcg
gtgggcgccaaggtgcgcgtgcgcggcgagatgcgcggcggcttcgtggggcggcagatc
atgcatccgaccgtcaaggcggccggcacggcgctgcccaacgcgctcacgcccgtgtac
tcgaccgtggccgggctcgcgcagccggtgctgcggcgcgaggtgcgctcgggcctggcg
cgcgcgctgctcgacgagaccatcccggtgcagatcggcctgcgcggcgcgtgggacctg
cgcagcgcgctgagcttcctgcactacccgacgcccgacgtgtcgatcgccgcgctcgaa
gaccacagccacccggcgtggcagcgcatcaaggccgaggagctgctggcgcagcagctc
tcgcagctgcaggcgcggctggagcgcgcggcccagcgtgcgccggtgctgccggcgtcc
accgacgcggcggcgagctcgctgcatgcgcagttgctcgccgtgctgcccttcggcctc
accggcgcgcagcagcgcgtgggcgaggagatcacggccgacctgcatcgccaggtcccg
atgcaccgcctgctgcagggcgacgtgggctcgggcaagaccgtggtcgcggcgctggcc
gcggcgcgctgcatcgacgcgggcttccagtgcgcgctgatggcgcccaccgaaatcctc
gcggcccagcacttcggcaagctggtcggctggctcgatccgctgctggccgagcgcggc
ctgcgcgtggcctggctcacgggcagccagaagaagaaggaacgcgacgagatgtcggct
gccgtcgaaagcggcgaggctgcgctggtcatcggcacgcacgcggtcatctcggaaaag
gtgcgcttcaagaacctggcgttggccatcatcgacgagcagcaccgcttcggcgtcgcg
cagcgcctggccctgcgcggcaaggcgggcggcgacctcgaaccgcatctgctgatgatg
agcgccacgccgattccccgcacgctcgcgatgagctactacgccgacctcgacgtctcc
acgctcgacgagctgccgccgggccgcacgcccatcgtcaccaagctggtggccgaccac
cggcgcgacgaggtcatcgaccgcatccaggcgcagatttcgcaaggccgacaggtctac
tgggtctgcccgctgatcgaggagagcgaagcggtcgacctgcgcaacgccaccgaaacg
cgcgacgaactcgccggcacgctgggcgaacacatccaggtcggcctgctgcattcgcgc
atgcccacggccgagaagcaggcggtgatggcggccttcaccgcgaacgaaatccaggtg
ctcgtgagcacgacggtgatcgaagtgggcgtcgacgtgcccaacgcctcgctgatggtg
atcgagcatgccgagcgcttcggcctctcgcagctgcaccagctgcgcgggcgcgtgggg
cgcggcgcggcggcctcggcctgcgtgctgctctatgcgccgggcgacagcgggcgcgtc
ggcgaagcggcgcgcgcgcggctcaaggccatggccgagaccggcgacggtttcgagatc
gcgcggcgcgacctcgagattcgcggccccggcgagttcctcggcgcgcgccagtcgggc
gcgccgctgctgcgctttgccgacctcgcgaccgacacgctgctgctcgactgggcgcgc
gagctcgcgccggtgatgctgcagaagcaccccgagctggcgcaacgccacatcgaccgc
tggctcggcaccaaggccgaatacctcaaggcctga
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