Vibrio campbellii ATCC BAA-1116: M892_15585
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Entry
M892_15585 CDS
T02837
Name
(GenBank) LysR family transcriptional regulator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
M892_15585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vca03000
]
M892_15585
Transcription factors [BR:
vca03000
]
Prokaryotic type
Helix-turn-helix
LysR family
M892_15585
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AGU95666
LinkDB
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Position
I:complement(3363002..3363877)
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AA seq
291 aa
AA seq
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MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEDSVNLRLLNRHARKLSLTEA
GERFYHECSPLLQRLTSTAEEITDDCRGASGKIKISAPYNLTKRMMMPMFNAFMKQYPDI
NIELTTESNADQLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPDYLNANPAPNHA
EELSNHSLLKGSPLIKWTLINSKGESVVNVERGRFQANALNVVRSSCSEGLGITLMPDVM
IKEYIESGDLVRILPDWSANPRDIYMLYNHKDHLPEKVRLFIDFVIAYNIH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatgatctaaacctatttcgattggttgtcgaaaatgggagctataccgca
acttcgcgaaaaaccatgattccggtggcaaccatcacccgacgcattcaagcgctagaa
gactctgtcaatcttcgattgctgaaccgtcatgcgcgtaagctttctctgactgaagcc
ggggaacgcttttaccatgaatgctcaccactgttgcaacgcctaacctcaaccgctgaa
gagattacggatgactgtcgtggggcatcgggcaagataaaaatctctgccccgtacaac
ctgacaaagcgcatgatgatgccaatgttcaatgcgttcatgaaacagtacccagatatc
aacatcgaactgacaacggaaagcaatgccgatcaacttgatcctactgagtgggatgtg
atcttccgtgttggtccacaacgtgattcaagcttgattgcacgtaaaatcggtgaagtg
aaagacatcctggttgctagtcctgattacttgaacgcaaacccagcgccaaatcatgct
gaagagctttctaaccactctttgctaaaaggctcaccacttatcaagtggaccctgatc
aacagcaagggcgagtctgtggtgaacgtagaacgcggccgtttccaagctaacgcactg
aacgtagtacgtagctcttgttcagaaggtttaggtattactttgatgcctgacgtgatg
atcaaagagtacatcgaaagtggtgacctagtgcgtatactgcctgattggagcgcaaac
ccgcgcgacatttacatgctgtacaaccacaaagatcacttaccagagaaagtgcgcttg
ttcatcgactttgtgattgcttacaacattcactaa
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