Venturia canescens: 122411135
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Entry
122411135 CDS
T09386
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcan03041
]
122411135
Spliceosome [BR:
vcan03041
]
Common components
Common spliceosomal components
General mRNP proteins
122411135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
Nup35_RRM_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
122411135
NCBI-ProteinID:
XP_043275629
EnsemblRapid:
LOC122411135
LinkDB
All DBs
Position
5:complement(117813..124752)
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AA seq
577 aa
AA seq
DB search
MRGVSESSPSRTMAEDLDVEAMLEAPYRKGEQDSSTKDKTTNKENGSSRKSGKSKHRSRS
RSRSRERREKRDRDRSERDRDRDRDRDRDRDRDRDRDRDRDRDRDRKRKSRSREKRDRSE
KDSGSGEKDREKKDKDRDRERERDRDRDRDRDRDRDRERDRDRDRDRDRRRRRSLTPIIL
PRARPPFGKGVSPLRLRSDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRL
ITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGIPIVVQPTQAEKNRMGNSMPNLMP
KGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADD
AKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLLDTDELDRSGIDLGATGRLQLMFKL
AEGTGLELPQAAANALNMAPTTTVPQPPPQAAPPIATQCFMLSNMFDPSNESNQSEYFDE
SNPTWSREIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAAVNSLHGRWFA
GRVITAAYVPLVNYHSLFPDAMAALQLLAPSAPRRGL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcgtttcagaaagctcaccaagtcgtacaatggcggaggacttggatgtcgag
gcgatgctggaagcgccatataggaaaggggagcaggactcttcgaccaaagacaaaacc
accaataaggagaatgggtccagcaggaagtcagggaagagcaaacatcgctcgcgcagt
cgctcacgctcgcgggaacgtcgggaaaaaagagatcgcgatcgcagcgagcgcgatcgg
gacagagaccgtgatcgtgatcgtgatcgtgaccgagatcgtgatcgtgatcgtgatcgt
gacagagatcgcgatcgaaaacggaaatcgcgttcccgagagaaacgggatcgaagtgaa
aaggattctggaagtggggagaaggatcgcgagaaaaaagacaaagatcgcgaccgagag
agggagagggacagagacagggaccgagatagagacagagacagggatcgtgaacgcgat
cgtgatcgtgatcgcgacagggatagaaggcgaagaagatcactcacacccatcattctg
ccgcgtgctagaccaccatttggcaaaggcgtcagtccgttacgactccgatccgacgag
ctgacgcccgaggaacgtgacgctcgaacggtcttttgtatgcaattgagtcagcgtata
agggcacgcgatttggaagaatttttctcgagcgttggaaaagtacaggatgtcagactt
attacttgtaacaaaactagacgattcaaaggaatcgcttatgttgaattcaaggatcct
gagagcgttacactcgcacttggattatcgggtcaaaaattgttgggtataccaattgtg
gtgcagccgactcaagccgagaaaaatcgaatgggcaattccatgccaaacctgatgcca
aaaggtcaaacaggtccaatgagactctacgttggttctcttcactttaacattacggaa
gatatgttgcggggtatatttgaacctttcggaaagattgataacattcaattgataatg
gatcctgaaacgggtcgtagcaaaggctacgggtttttaacttttcgaaacgcggatgac
gcaaaaaaagcgttggaacaactgaatggtttcgagcttgcgggtcgaccgatgaaagtt
ggtaacgtcactgaaagaacagacctcattcaaggaccttcgctcctcgatacagacgag
cttgatcgcagtggaatcgatcttggcgccacgggacgtcttcaacttatgttcaaactc
gcggaaggcactggtctagaattaccacaagcggcggcaaatgctctgaatatggcgcca
accacaactgttcctcaacctccacctcaggctgcaccgcccatcgctacacagtgtttt
atgctatccaacatgtttgatccatctaatgaatcgaatcaatctgagtatttcgatgaa
tcgaatccaacatggtcgagggagattcgcgacgacgtgatcgaagagtgcaacaagcac
gggggcgtattgcacgtttacgtcgatcaagcgtcgccacagggcaatgtttacgtcaaa
tgtccatcaatcgctactgccgttgcggcggtaaattcgttacacggacgatggttcgct
ggtcgtgttataacagcggcttacgtgcctcttgttaattatcattcacttttcccggac
gcgatggccgctttgcagttgctcgcaccgagtgcaccgagacgcgggctgtga
DBGET
integrated database retrieval system
