Venturia canescens: 122414039
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Entry
122414039 CDS
T09386
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcan03019
]
122414039
03036 Chromosome and associated proteins [BR:
vcan03036
]
122414039
Messenger RNA biogenesis [BR:
vcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122414039
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122414039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
M_domain
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
122414039
NCBI-ProteinID:
XP_043280760
EnsemblRapid:
LOC122414039
LinkDB
All DBs
Position
7:complement(8947269..8981365)
Genome browser
AA seq
2351 aa
AA seq
DB search
MKKMLSRERQENEFCRLVSNLGFYALPAKEELSPMFPHNSSSHEISTETNAFVQNSKGDV
VVLEGSSLSGAREGERPEHARYCDIEFINSSMMAAPISHPKATAANDFLTVLPRQSGELS
FAGVGEACQSVAKETTKNPTNHLLTYDNNNKVNNHNNAEHNHHKYRKQKTPGSLFDQQLG
SSAVTSKSTCKPLSDNKDSFSDISVRVLKVSVRLVLKEKEEKEEKEEEEGKVEAEEEEEK
AKKEEEGKEKREERGETCRPAGVPSLVRIPKSDRPQRQSRLANIVDNYSLLGSRLDHGEN
NKFKANISLVSNNYYYCNNNSKSVILLSSTSHGDNYLLAELGLAGVDAKNPVNLVVDHYD
ENEASDKTNNDDDQVQDQYRKSRGNNGGDRVRLAVNPFAIGNRVIGETIRLNDSTWTSLF
SFFSSLFFGSFSSPSFKNANHKDEVYKSDGKTTTRTATKKMATMIESSSPPTTSTSSSSS
SSSSSSSKIVKKEKASMGNLRLSLVRNNSKAQHHASSSITLIVYKNEITDHTLQSFLDNL
TKKRAASRITTINNNYLIDCVTVIELKQRICVPLLLMIEGYNDNCGNNDDYDYYYHHHHH
HCTIDNNNGVARKLVSRIGVNDNGNEKRDNYYYENDDEDDETMNISNNNQDVIEDIVNVA
VCYKTSCKTTTNISLLGSQNDGIRRTEATMFTVGALSFQDNDKSNKPLNDSFKDNKYQVS
TKVDLESNSAYVKSVSKSTPSVKSSDKSETSRVKVYEEMTYYKFEDKDDKDEDDEDKDDF
DADDNVDYEEARIGATDGILAKNDVISVSKIVNIPKPTTCEPTMTLNCQSATVTSQTNDV
PVSRGIDNTSSHDFNANVCPDDEQSSNKMIEDCVNDLDNDHYTAYDRKLSRSNDYQTISR
PRYYDENTTITEYIVEPPTSRVDDEIIDKSYIDWKYNDSNDEPLSSHRISNELFDQNNLN
ENNAKNYANFGNGLFTKYSSVTMSQIRAYIDAYKTAYENNEKSRDELKNLLLNIVSGAHS
NERYEQLYREQKHDPIKEYKQRWGIPSMLGLCGGGESSLNSGGGTNWGPAPATTPNNNNN
ANQSGWGGTPGNPPGSAGPPSNWGGNNVNRPVTGNPNSNQNQGPPGTQNNPGNVNKVNNP
NQPGNPQSGQPTSQSSNSTQGNQNSAGQWSQGKPNNAVGPGVPNPTAQNNNGNNVQQQPS
GSNANNNQANNPAQGTVATTGTAAATNPSTKAQLEQLNTMREALFSQDGWSFQQVNQDTN
WDVPASPEPPMTKDGVPMWKPPVNNGTDLWEANLRNGGQPPPPQQAKTPWGHTPSTNIGG
TWGEDDDAADSSNMWTGAPAPSQPNTAPWPGAAGNQPGGCSSWGDPRIDPRDPRDLRSVD
PREMRDPRDHRMTLDPRDHMRVMDPMAGRDHRMTDMRGDPRGISGRLNGANADAMWGQPP
GPPHHQLSHQHPSGGPPAKMINQSSMNQWAAPPPKEMIPGKPSGWEEPSPPAQRRNVPNY
DDGTSLWGNPAANQRPMPGSKVSHWKDLPTPNLARGGMQCPPGMPQNRMPGQPGMKPDVG
GGGTGGGGGGGGGGGGGGGGGGGSGGGPMWGHPGGPGGRNGSWADGQHEATTWDEPKTPA
AWNEPPLNQATWGGPSGHKSKPMGGPGATSWADTDMDRGPSWTHPAKPALTKELIWNSRE
FRYLCDLGYKKDDVEVALRNREMNRDEAQELLSQLHSLDQWRRHDAPSGYDPSSQPSSSG
AYPRFNHVAQQMSFPPGAGVPSGAATGNVSGSVASASLLKLQQQQQQQAAVQLQQQQPSA
NPPQPPFNQASRTLQNPPSTQQLRMLVQQIQLAVQEGYLNQQILNQPLAPPTLLLLNQLL
QQIKVLQQLHQQHSMQNPLKGNGEIILRISVQITKTKQQIANLQNQIAVQQATYMKQQQQ
QQQQQQQHQTGPSQTSDYYKTSSVHDPMSALQNSFSDLAMNKEPPVSQQQSRLNQWKLPS
LDKDGDLTANEFSRAPGTTSKPPQTPVGLSHSHSSPNMNPLLGQGDGTWSSRLGDSGWPD
AGNNDATDGKDWQPGGTAFTDLVPEFEPGKPWKMKNIEDDPSITPGSVVRSLSLAAIKDP
DTIFSSSSKASPPPQSVNADTSIPSLSNSTWSFNPPATTQSAFASSKNTWTDPTPPTYSE
LWGVPMRVRGPPPGLGSKGAGWPSGTWLLLKNLTPQIDGSTLKTLCMQHGPVLDFRLFLN
HGIALTKYSTRDEATKAQGALNNCVLGNTTIFAESPVDNEAHTLLHTLSHGGGGQQQSSN
SGNTGWGMRPTKKSGPSPDTWSGSSSQLWGAPPSSNSLWSNSGIDTSDTQRTTPSSLNLY
LPGDLLGGESM
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatgctgtcgagagaacgacaagagaatgaattttgtagattggtttcaaat
cttggtttctatgcattgcctgccaaagaagaactgagcccaatgtttccacacaattct
agttcacatgagatttctaccgaaacaaatgccttcgtacaaaattccaagggggatgta
gtagtattagagggaagcagtctgagtggggcgcgggagggggaacgaccagagcatgct
aggtactgtgatatcgaattcataaacagcagcatgatggcagcacctatcagccacccc
aaagctaccgccgccaatgacttcttaaccgtcctgccacgccaatctggtgagctcagc
tttgccggtgtaggcgaggcctgccagtcagtggcaaaagaaaccacaaaaaacccaaca
aatcaccttctaacctacgataataataataaagtaaataaccacaacaatgcagaacat
aatcatcacaagtacagaaagcaaaaaacaccgggctcgctgtttgatcagcagctaggc
agctccgccgtaacgtctaagtctacgtgtaagccgttaagtgataataaggatagcttt
agtgatataagcgttagggtactaaaagtaagtgtacgcttagttttaaaagagaaagaa
gagaaggaggagaaggaggaggaagaaggaaaagtagaagcagaagaagaagaagagaaa
gcaaaaaaagaagaggaagggaaggaaaagagagaagagaggggtgaaacgtgccgcccc
gctggggtacctagcctagttaggatacccaagtctgatcgcccccagcggcagtcgcgt
ctcgccaatattgtcgacaattactccttactagggtcccgccttgaccacggcgaaaac
aataaatttaaggctaatattagtctcgtaagtaataattattattattgtaataataac
tcaaagtctgtgatattgctcagctcaaccagtcacggtgacaactatctcctggccgaa
ttaggcctcgctggcgtagacgccaaaaacccggttaatctagttgtcgatcattacgat
gagaacgaggcgagtgacaaaaccaacaatgacgacgatcaagttcaagatcaataccgc
aaaagccgaggaaacaacggcggggatcgtgtgagattggccgttaatcctttcgcaatt
ggtaatcgagtgattggcgaaacgatacgcctcaacgattcgacgtggacgtccttgttt
tcgttcttctcctccttatttttcgggtcgttctcctcaccgtcgttcaagaacgccaat
cacaaagacgaggtttacaaatcggacggaaaaacaacaacgcgaacggcaacgaagaag
atggcaacgatgatcgagtcgtcttcaccaccaacaacatcaacgtcatcatcatcatca
tcatcatcatcatcatcatcgaaaatagtgaagaaggagaaagcttcgatgggaaatctc
cgtttgtcactcgtgcgaaacaattcaaaggcgcagcatcacgccagttcttccattacg
cttatcgtttacaaaaacgaaatcaccgaccacacattgcaatctttcctggataatctc
actaaaaaacgagctgcgtctcgcattacgactataaataataattatctaatagattgc
gtcaccgtgatcgagctgaagcaacgcatatgtgttccattattgttaatgattgagggt
tacaatgacaattgcgggaataacgatgattacgattattattatcatcatcatcatcat
cattgtacgatcgataataataacggagttgctcgtaaactcgtctctcgtatcggagtc
aacgacaatgggaacgagaaacgcgacaattattattacgaaaacgacgacgaggacgac
gagacgatgaatattagtaacaataatcaagatgttatcgaagacattgttaacgtcgct
gtgtgctacaagactagttgtaaaacgactactaatattagcttattagggtctcaaaat
gatggtattagacgtaccgaagcaacaatgtttaccgttggtgctctttcatttcaggat
aacgataagtctaacaagcctctcaatgatagttttaaggataacaagtatcaagtgtct
actaaagtcgatcttgaatctaactctgcgtacgttaagtccgtatctaagtctacgccg
agcgttaagtctagcgataagtctgaaacgtctcgcgttaaagtttacgaagagatgacg
tattataagttcgaagacaaagacgacaaagacgaggacgacgaagacaaagacgatttc
gatgctgatgataatgttgattacgaggaagctcgaattggcgcaactgacggaatactt
gcgaaaaacgatgttataagtgtcagtaagatcgtcaacattcctaaaccgactacctgc
gagcctacgatgacgcttaattgccaatcagccaccgtcacatcccaaacaaatgatgta
cctgtatctcgtggcattgataacacgagttctcacgactttaacgcaaacgtttgtccc
gatgacgaacaatcgtctaacaaaatgatcgaagattgcgttaacgatttggacaacgat
cattacaccgcgtacgatcgtaagttgtcacgatcgaacgactatcaaacgatctctcgt
ccacgttattacgacgaaaatacgacaataacggaatacattgtcgaacctccgacaagc
cgcgttgacgacgagatcatcgataaatcatacatcgattggaaatataacgactcgaac
gatgagccattatcgtcccatcgtatctccaacgaactttttgaccaaaacaatcttaac
gagaataatgccaagaattatgcaaatttcgggaatggattattcacgaaatattcctcc
gtcacgatgtcacaaatacgcgcttatatcgatgcttataaaacggcttatgaaaacaac
gagaaaagccgcgatgagctcaagaacttgttactcaacattgtttccggagctcattct
aacgagcgatatgaacaactctatagagaacaaaaacatgatccgatcaaggagtacaaa
caacgatggggtataccgagcatgctaggactctgcggaggaggagaaagctccttgaac
agcggtggtggaaccaattggggtcctgcacctgcgacaacacccaacaacaacaacaat
gccaatcagtccggttggggcggaactcccggcaatccacccggtagcgctggaccaccg
agcaactggggtggtaacaacgtcaatagacccgtcaccggcaatccgaattcgaatcaa
aatcagggaccaccaggaactcaaaataatcccggcaacgtaaacaaagtgaacaacccg
aatcaaccaggaaatcctcaatcgggacaaccgacctcccagtcatcgaattcaacccaa
ggcaatcaaaacagcgctggccaatggtcacagggaaagcctaacaatgcagtcggtcct
ggagtgccgaacccaacggcccaaaacaacaacggtaacaacgtccagcaacagccgtcg
ggatcgaacgctaacaacaatcaagctaataatccagctcagggcaccgtcgcgaccact
ggaactgccgccgctacaaatccttcgaccaaagctcaactcgaacaattgaatactatg
agagaagctctcttcagccaggacggttggagtttccaacaagtgaatcaagacacgaac
tgggacgttccggcttcaccggaaccaccgatgaccaaggacggtgtaccgatgtggaaa
ccaccagtaaacaacgggaccgacctctgggaagctaacttgcgaaacggtggtcaacca
ccacctcctcagcaagcaaaaacaccttggggtcacactccatcgactaatattggagga
acatggggtgaagacgacgacgctgctgattcatccaacatgtggaccggagctccagct
ccgagccagccgaatactgctccatggcccggagctgcaggcaatcaacctggaggttgt
tcgagctggggtgatcctcgaatcgatccgcgcgatcctcgggatctccgttcggttgat
cctcgtgaaatgcgtgatccccgtgaccatcgtatgactctcgatccgcgtgatcatatg
cgcgtaatggatccaatggctggacgtgaccatcgcatgacggatatgaggggagatcct
cgtggaatatcaggccgtctaaacggtgcaaatgcggatgcaatgtggggtcaaccaccg
gggccaccgcaccaccagttgagtcatcaacatccctcgggcggtccacctgccaaaatg
ataaatcaatcgagcatgaatcaatgggctgcaccgccgccgaaagaaatgattcccggg
aaaccatccggttgggaagagccttcgccaccggcccaacgcagaaacgttccgaattac
gatgatggtacaagcctgtggggaaatcccgctgccaatcaacgaccaatgcccggcagt
aaagtctcccactggaaagatcttccgacaccaaatcttgcccgtggtggcatgcagtgt
ccaccgggaatgcctcaaaatcgtatgccgggtcaaccgggaatgaaacctgacgttggc
ggcggcggtaccggcggcggaggtggtggtggtggaggcggcggtggtggcggtggcggc
ggaggtggtagcggcggaggaccgatgtggggacaccccggaggtcctggtggccgcaac
ggatcatgggccgatgggcaacacgaagctactacttgggacgaacctaaaacacccgcg
gcatggaacgagcctccgttgaatcaagcaacttggggtggacccagtggccacaaatcc
aaaccaatgggcggaccgggtgccaccagttgggccgatacggacatggatcgcggaccg
agttggacacatccagcgaaacctgcactcaccaaagaactcatttggaatagccgagaa
ttccgatatctctgtgatcttggctacaagaaagatgatgtagaagtggcgctcagaaat
cgggaaatgaaccgcgacgaagcacaagagttactcagccaattacactcgctcgatcaa
tggcgtcgtcacgacgctccctcaggctacgatccatcgagtcaaccttcttcgtccgga
gcttatcccagattcaatcacgtcgctcaacagatgtccttcccaccgggtgccggagtg
cccagcggggctgctaccggcaacgttagtggctcggtcgccagcgccagtcttctcaag
ctccagcaacagcagcaacagcaggccgcggttcagctgcagcaacaacaaccgagtgcc
aatcctccgcaacctcctttcaaccaggcatcgagaaccctccaaaatccaccgagcacc
cagcaactgcgtatgctcgtgcaacaaatacagctagctgtccaagagggttatctgaat
cagcagatactgaatcaacccctcgcaccgccaacactcttgttgctcaaccaattgctc
cagcagattaaagtattgcagcaattgcatcaacaacattcaatgcaaaatccattgaag
ggcaatggggaaataatccttcggataagcgtacaaataactaagactaagcaacaaatt
gcgaatctccagaatcaaattgctgttcaacaagcaacatatatgaaacaacaacaacag
caacaacaacaacagcagcaacatcaaactggaccttctcaaacgtccgattattataaa
acttcgtcggttcacgatccaatgtccgctctacaaaacagcttcagtgatttggctatg
aacaaagaaccaccggtcagccaacaacagtcacgtttgaaccaatggaaattaccatcg
ctggataaagacggcgatttgaccgcaaacgagttttcacgcgctcccggtacgacgagc
aagccaccgcagacgcccgtaggcttgagtcactcgcacagcagtccaaacatgaatccc
cttttgggacaaggagacggcacctggtcgagccgacttggcgatagcggctggcccgat
gccggtaacaatgacgccaccgatggaaaagattggcaacccggtggcactgcattcacc
gatctcgtgcccgaatttgaacctggcaaaccttggaagatgaagaacatcgaggacgat
ccaagtatcacacctggttcagtcgtgcgttctctttctctcgccgcaatcaaagatccc
gatacgattttctcatccagcagcaaagcttcaccacctccgcaatcagtcaacgctgac
acctcgatacccagtctcagcaattcaacttggagtttcaatccaccggcgactactcag
agcgcctttgccagttcgaagaacacttggacagatcccactcctccgacgtattcggaa
ttgtggggtgtaccgatgagagttcgcggtccgcctcctggcctcgggagcaaaggagca
ggttggccgtcaggaacgtggttacttctgaaaaatctcacccctcagatcgatggctct
accttgaaaaccctctgcatgcaacacggacccgtcttggatttccgtcttttcctcaac
catggaattgcgcttactaaatactcgacccgcgacgaggccaccaaggcccaaggcgcg
ttgaataattgcgtgctcggcaacacaacgatattcgcagaatcgccggtcgacaacgag
gcccacactctgctgcacacgctcagtcacggtggcgggggtcagcagcaatcgagtaat
agtggaaacaccggttgggggatgcgaccaacgaaaaagtcaggtccatcaccagacacg
tggagcggtagttcgagccagctgtggggtgctccgccatcgagcaactcattgtggagt
aacagcggtatcgacacgagcgatacgcaaagaacgacaccgagttcgctcaacttgtat
ttgcccggagatcttctgggaggtgagtcgatgtag
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integrated database retrieval system
