Venturia canescens: 122418136
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Entry
122418136 CDS
T09386
Name
(RefSeq) histone deacetylase HDAC1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
vcan
Venturia canescens
Pathway
vcan03082
ATP-dependent chromatin remodeling
vcan03083
Polycomb repressive complex
vcan04213
Longevity regulating pathway - multiple species
vcan04330
Notch signaling pathway
vcan04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122418136
03083 Polycomb repressive complex
122418136
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122418136
04350 TGF-beta signaling pathway
122418136
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
122418136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcan03036
]
122418136
Enzymes [BR:
vcan01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122418136
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
122418136
HDAC complexes
Sin3A-HDAC complex
122418136
BRAF-HDAC complex
122418136
REST complex
122418136
SHIP complex
122418136
MiDAC complex
122418136
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
122418136
Heterochromatin formation proteins
Other heterochromatin formation proteins
122418136
Chromatin remodeling factors
NuRD complex
122418136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
122418136
NCBI-ProteinID:
XP_043288123
EnsemblRapid:
LOC122418136
LinkDB
All DBs
Position
11:complement(9072182..9078320)
Genome browser
AA seq
491 aa
AA seq
DB search
MSTMTHSRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMAEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTIEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDGATVEDSEAEEKINPDERLPQRDLDKRIQHENE
YSDSEDEGDGGRRDNRSFKGSRKRPRLDKTQEGIDGDMKKEDDIKSEVKDEKDEKSNAMN
DEAKKDGSGNP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccatgacgcacagtaggaaacgtgtttgttactattacgacagtgatattgga
aactattactatgggcaaggacatccgatgaagccacatcgcataaggatgacacacaat
ttgctgttgaattatggcctctacagaaaaatggaaatttatcgtcctcacaaagccacg
gccgatgaaatgacgaaattccacagcgacgagtacatcagattcttgagatcgattaga
ccagataacatggcagagtacaacaaacaaatgcagagattcaacgtcggagaagattgt
ccagtttttgatggactctacgagttttgtcaactgtcagccggtggttcggttgccgca
gctgtcaaattgaacaagcaagcctccgaaatctgcatcaactggggaggaggcttgcac
cacgcgaaaaagagcgaagcctcaggtttctgctacgtcaatgacatcgttctcgggata
ttggagctgcttaaataccaccagagagttttgtacatcgacatcgatgtgcatcacggc
gacggggtcgaggaggctttttatacaacggatcgtgtcatgaccgtttcttttcataaa
tacggcgaatattttccgggaactggagatttgcgcgacattggagccggaaagggaaag
tactacgctgtcaacattccgttgagggatggcatggatgacgagagctacgagtccatt
ttcgtaccaatcatttccaaagtcatggaaactttccaaccttccgctgtcgttctccaa
tgcggcgcggactcgttgactggcgaccggttgggatgtttcaacctgacggttcgtggc
cacggcaaatgtgtagaatttgtgaaaaaatacaatttgccatttttgatggttggcggt
ggtggttacacgatcagaaacgtttcgagatgttggacgtacgaaacttcggtcgccctc
ggctccgaaatcgccaacgaactgccctacaacgattactttgaatatttcggacctgac
ttcaaactccacatcagcccttcgaatatggcaaaccaaaacaccatagaatatttggaa
aaaattaaaacgaggttattcgaaaatttgaggatgttgccacacgcaccaggagtccaa
gtccaagcgattcccgaggatggggcaacggtcgaggactctgaagccgaggaaaaaata
aacccggatgaaagattaccacaacgagatttagacaaaaggatacaacacgaaaacgag
tacagtgatagcgaggacgagggcgacggtggtcgtcgagataatcgatctttcaagggc
tcgcgtaagcggccgagactggacaaaacgcaggaaggaatcgatggagacatgaaaaaa
gaggacgacataaaatccgaagtaaaagacgaaaaagacgaaaagtcgaacgcgatgaat
gacgaggcgaagaaagacggtagtgggaatccctga
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