Vanessa cardui (painted lady): 124536536
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Entry
124536536 CDS
T09161
Name
(RefSeq) zinc finger CCCH domain-containing protein 18 isoform X1
KO
K13092
nuclear protein NHN1
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcd03041
]
124536536
Spliceosome [BR:
vcd03041
]
Common components
Common spliceosomal components
General mRNP proteins
124536536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
Trimer_CC
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
124536536
NCBI-ProteinID:
XP_046969053
EnsemblRapid:
ENSVCAG00000012309
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Position
16:complement(8327906..8338207)
Genome browser
AA seq
918 aa
AA seq
DB search
MDSEDSRDATGDVRSSSSSSSSTSRSRRSSSSDSSKKDPKSPPHSPTSPRSNGPRSPSPE
SHSQLSQRSTSMGKQPHSPDNLSGAHSDINSPENSLPASPIGPKSPDPPKSPSDVASNIG
SPEQHEHYSSAPPSAGEGPKTPQSPGSSVKSRPVTPTNRSEPMSPDSASQATSPPSRNLE
PHSPTSSPSPDRASSQSSPPRSPIKKNEWSPKEKWRRHTKAEQKMVAAPRNRSRSESSQS
SRSSTTYNKRTNSKDPVTEAISDGEMESDQEDGKSRSKSRSKSVTSDKQDKDHNISHEDL
SDVSDVDSIGPDDTEKGTKIKSKSPSPNKKKEVINGNEGTSSQSSPKSDSGKGDAYKSEK
VPQEKISNTEDAEEQLDFEAEEGECIEPAKTRDQSNGDIEAQAREKEDVKAGRRSRGSSL
EEGEVSDEAERRPEENEPRPVCRFFSRGACTWGVSCRFLHPGVTDKGNYNMFEVIRGVPA
GAAFPAPRDAAPPESAWERGLRTAKEMLRIANKRKEQDMDFEEKKLHLSVGGVVHDPDAE
LAYAAAAVGASPPHDLPPAHRDPDVYRQYGMMYRGGRFPRPPVDERERYYERERGFERER
PFERPPYYDEPMPAPEELPYHKRRVRSSREVIVQRAEIERREGREVREGREARGREGREG
REGRDGRGDEWADPWMRAEPAARKRRPPSSEDSYSSSSSSNSSSRSSGSPGARRKRRASS
SSRQRLSPSVIVRERRLASARATAMNPPAPRRRAPSPAAARQLAANPPPPAPHRHKEEMD
PYGRNKPASRNRNRKKYSRSSSSGSESSSSSSESESESRSSSSSGSSGARRARHARLLNA
AARPRLNAKSNTGLVPAVSAVTSKKEVSSDKEIVGKKRGATSPVSGAAPAKKSVSRREEL
LKQLKAVEDAIARKRSKI
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggattctgaagattctcgagatgctacaggagatgtacgatcatcatcaagcagtagt
agctccacatctagaagtcgtagaagttcatcatcagacagttctaaaaaagaccctaaa
tctcctccccattcgcctacctcacctaggtcaaatggaccacgttctccttcaccagaa
agtcattcacaactgtctcagagatctacttctatgggtaaacaaccacattcaccagat
aacttgagtggtgcacattcagatataaattcaccggaaaattctttgccagcttcacca
attggccctaaatctccagatccaccgaagtcacctagtgatgttgcttcaaacattggt
tctccagaacaacatgaacattattcatcggcccctccatcggctggggagggtccaaaa
acacctcagagtcctggaagctctgtaaagtctagacctgttacacccacaaacagatct
gaacctatgtctccagattctgcatctcaggcaacatcaccaccttccagaaatctagaa
ccacattctcctacttcaagtccatcaccagacagagcgtcatctcagtcttcccctccc
agatccccaattaagaaaaatgaatggagcccaaaagaaaaatggagaagacatacaaag
gctgaacaaaaaatggttgctgcaccacgaaaccgaagtaggtcggagtcgagtcaatca
agcaggagttcaaccacatataacaaaagaactaattctaaagatcctgttactgaagct
atatctgacggagaaatggaatcagatcaagaagatggcaagtcgagaagcaagtcaaga
agcaagtcagtgacaagtgacaaacaagataaagatcacaacataagtcatgaagacttg
tcggatgtttctgatgttgattctattggacccgatgacacagaaaaaggaacaaagatt
aaatcaaaatctccatcacccaacaagaaaaaagaagttatcaatggtaatgagggcaca
agttctcaatcgtcccccaagtctgatagtgggaaaggagatgcctacaaatcggaaaaa
gtgccccaagagaaaattagtaatactgaagatgctgaggaacaattagactttgaggca
gaagagggtgaatgtattgaacctgcaaaaaccagagatcagtcgaatggagacatagaa
gcacaagccagggagaaggaggacgtgaaagccggtagacggtcgcgaggttcctccctc
gaggaaggcgaggtttcagatgaggcggaacgacgtcccgaggagaacgagccaaggccg
gtctgcaggttcttctccaggggagcctgcacctggggcgtcagttgcagattcctgcac
ccgggtgtaacggacaagggcaattacaacatgttcgaggtgatccgcggcgtgccggcc
ggcgccgccttccccgcgccgcgcgacgccgcgccgcccgagtccgcctgggagcgcggc
ctgcgcaccgccaaggagatgctccgaatagcaaacaagcgcaaggagcaagacatggac
ttcgaggagaagaaattgcacctgtccgtgggcggggtggtgcacgacccggacgccgag
ctggcgtacgcggccgccgccgtgggcgcgtcgccgccgcacgacctgccgcccgcgcac
cgcgaccccgacgtctacaggcaatacggcatgatgtatcgtggcggtcgattcccccgt
ccaccggtggatgagcgcgaacggtactacgaacgtgaacgtggttttgaacgcgagcgt
ccctttgagcgaccaccgtactacgacgagcccatgcctgctccagaggaattgccttac
cacaagcgtcgagtccgttcgtctcgtgaagtcatagtgcagcgcgctgaaatagagcgg
cgggagggccgagaagttcgagaagggcgggaggcccgcggtcgggaaggccgagagggt
cgagaggggcgcgacggacgcggagatgagtgggccgatccttggatgcgcgccgaaccc
gcagccaggaaaagaagacctccatcttctgaggattcctactcatcgtctagctcttca
aattccagttcgcgtagttcaggcagccctggggcgaggcgtaaaagaagagcatcgtca
tcttcacgacaaaggctgtccccgtcggtaatagtgcgcgagcggcggctggcgtcggcg
cgcgccacggccatgaacccgcccgcgccgcgccgccgcgcgccctcgcccgccgccgcg
cgccagctcgccgccaacccgccgccgcccgcgccgcaccgacacaaggaggaaatggat
ccctatggtcgaaataaacctgctagtcgcaatagaaatagaaaaaaatattccagatca
tcatcatcgggttcagaatcatcatcttcatccagcgagtccgagagcgaatcgcgttcg
tcttcttcatcaggcagttccggcgcacgtcgagctcggcatgcgcgtctacttaacgcg
gctgctaggccaagattaaatgcaaagtcaaatacgggcttagtacccgcagtttcagct
gtcactagtaaaaaagaagtctcaagcgataaagaaatagtaggtaagaagagaggagcg
acttcacccgtgagcggggcagcgccggcgaagaaatccgtttccagaagagaagaactc
ttaaaacaattgaaagctgtcgaggatgcaatcgctaggaagaggtcgaagatatag
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