Vibrio cholerae O1 2010EL-1786: Vch1786_II0549
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Entry
Vch1786_II0549 CDS
T01650
Symbol
malS
Name
(GenBank) periplasmic alpha-amylase precursor
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
vce
Vibrio cholerae O1 2010EL-1786
Pathway
vce00500
Starch and sucrose metabolism
vce01100
Metabolic pathways
vce01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Vch1786_II0549 (malS)
Enzymes [BR:
vce01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
Vch1786_II0549 (malS)
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Glyco_hydro_66
Motif
Other DBs
NCBI-ProteinID:
AET28967
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All DBs
Position
2:509801..511873
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AA seq
690 aa
AA seq
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MKLNALTLSLLSALALPALASPASTANLTVATTTNSRDFPLQADEPLVIPLTKGDYTLTI
SGIGGDCPPVPEQEIKFNTPIALNCHVPTQLPLSIRFTGDYAFQWQAQNNTLTFVRQTTK
AAKTEFHRPIPNVSCEVYQGGEVTLDLASSFADGTELQDAMTGQVVTIEQGKVRLTPSAN
SGGLVLLEPKQTAKAEPKQPFTYRNANIYFVMVDRFYNADPSNDGSYGRHKDGQEEIGTF
HGGDLKGVIAKLDHIQSLGTDAIWLSPIVEQVHGFVGGGEKGSFPFYAYHGYWTRDFTKI
DANFGKDEDLQTLVREAHRRGIKILMDAVINHAGYATLADLQQDAVQVVNAPMLPERWND
WKPSADENWHSFHQAIDYQSKNWQQWWGPDWVRAGLPGYPAPGSSDITMNLAGLPDFRTE
SPQAVTPPQWLLNNPGTRVVSKPNYTVADYLIEWQSDWVRRFGIDGFRIDTVKHVEGEVW
QRLKQRATESLAAWRKDNNQSGEPFWMMGEVWGHGAYRSPYFDDGFDALINFDIQKRMDN
GAACLSQMAMVYRDYAQTLAKYPDFNPVSYMSSHDTELFFGRFKSLDMQRNAANALLLTP
GAIQVYYGDEVAREAGPYADDFHQGTRSDMPWEWNAERQALLKHWQTLGQFRQRHPAIGT
GEHREIAQSNAYVFTRTLGEDKVVVAFVGR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaatgccttgaccctatcgctgctctcagctctagctttgccagcgctggcc
tcgccagcttccactgcgaatttaacggtagcaaccaccaccaacagccgcgattttcca
ctgcaagccgatgaaccactggtgatcccgctcactaagggcgactacaccttgaccatt
agcgggattggcggtgattgcccaccggtccccgaacaagagatcaaattcaacacgccc
atcgctctcaattgccatgtcccgactcagttacctttgagtatccgttttaccggggat
tacgcatttcagtggcaagcgcaaaacaatactctcaccttcgtgcgtcaaaccactaag
gcagccaaaactgagtttcatcgcccgatcccaaacgtcagttgcgaagtgtatcaaggc
ggtgaagtgactttagatctggcgagcagctttgccgatggaaccgagttgcaagatgct
atgactgggcaagtagtgaccatcgagcaaggcaaagtgcgcttaaccccttccgctaac
agcggcggcttggtgttgttggaacctaaacagacagcaaaagccgagcccaaacagccc
tttacctatcgaaatgccaatatttattttgtgatggttgatcgcttctacaacgcagac
ccaagcaatgatggcagttatggtcgtcacaaagatggccaagaggagatcggaacattt
catggcggcgatctcaagggtgtgattgcaaaacttgaccatatccaaagcttaggcaca
gatgctatctggctctctccgattgtcgaacaggtacatgggtttgtcggcggtggcgag
aaaggatcattcccgttttatgcctatcacggctattggacccgcgatttcaccaagatc
gatgccaactttgggaaagatgaggatttacaaaccttagtgcgtgaggcgcatcgtcgc
ggcattaaaattttgatggatgcggtgatcaatcatgcaggttacgcgacactcgccgat
ttacagcaagatgcagtacaagtggtgaacgcacctatgctgcctgaacgttggaatgac
tggaaacccagcgccgacgaaaactggcacagcttccatcaagccattgattaccaaagc
aagaattggcaacagtggtgggggccagactgggtacgcgcaggcttaccgggctatcct
gcgccgggcagcagtgacatcacgatgaatctcgccggtttaccggattttcgcactgaa
tccccccaagccgttaccccgccgcagtggctactcaacaatcccggcacacgagtggtg
agcaaacccaattacactgtcgctgactatttaattgaatggcaaagcgattgggtacgc
cgctttgggatcgacggttttcgcatcgacaccgtcaaacatgtggaaggggaagtgtgg
caacgcttaaaacagcgcgcgacggaaagccttgcagcgtggcgtaaagacaataatcaa
agcggtgagccgttttggatgatgggcgaagtgtgggggcacggtgcctatcgcagcccc
tactttgatgatggctttgatgcattgattaactttgacattcaaaaacgtatggataac
ggcgcagcctgtttgagccagatggcgatggtgtatcgcgattacgcgcaaaccctcgcc
aaatatcccgactttaaccccgtcagttatatgtcctcgcacgatactgagttgtttttc
gggcgctttaaatcactggatatgcaacgtaacgccgccaatgccctgctactgacaccg
ggtgctatccaagtgtattacggcgatgaagtcgcccgcgaagcgggaccgtacgcagac
gatttccatcaaggcactcgctctgatatgccttgggaatggaatgccgaacgccaagca
ctgctcaagcattggcaaaccttaggtcaattccgtcaacgtcaccctgcgataggaacg
ggagagcatcgcgaaatcgcccaatctaacgcttatgttttcactcgcacattgggtgaa
gataaggtggtcgtggcgttcgttggccgctaa
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