Vibrio cholerae O1 El Tor FJ147: IR04_08745
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Entry
IR04_08745 CDS
T03827
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IR04_08745 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcf01007
]
IR04_08745 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcf03016
]
IR04_08745 (lysS)
Enzymes [BR:
vcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
IR04_08745 (lysS)
Amino acid related enzymes [BR:
vcf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
IR04_08745 (lysS)
Transfer RNA biogenesis [BR:
vcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
IR04_08745 (lysS)
Prokaryotic type
Other AARSs
IR04_08745 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AJZ99230
LinkDB
All DBs
Position
I:794023..795555
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AA seq
510 aa
AA seq
DB search
MTDAVQNEINQEQIAQEENKLIAERRSKLDHIRKNCKANGHPNSFRRDSLAGDLQKKFGE
KSKEELEALNHVVSIAGRVMAKRGPFLVIQETSGRIQAYASKEVQQELKDKYQGLDIGDI
IGVQGALHKSGKGDLYVNMEQFQLLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNENSR
NAFIVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPE
LYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSV
ALEVLGSTSMPYGEHTVEFGGKYARMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIA
KSVHVDVEPFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFE
FFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQ
GIGIDRLVMLLTNTHTIRDVILFPAMRPQQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgctgttcaaaacgagattaatcaagagcaaatcgcgcaagaagaaaacaaa
ctgattgcagagcgtcgcagcaagttggatcacatccgcaagaactgtaaagcaaacggg
cacccaaactcgttccgtcgcgacagcctagcgggtgatctgcagaagaagttcggtgaa
aagagtaaggaagaactggaagcgctcaatcacgtggtgtctatcgctggtcgtgtgatg
gcaaaacgtggcccattcttggtgattcaagaaacctctggccgcattcaggcttatgca
tcgaaagaagtgcaacaagagctgaaagataaataccaaggtttggatatcggtgacatc
atcggtgtgcaaggtgccctgcacaaatccggtaaaggcgatttgtacgtcaacatggag
caattccaactgctgaccaaagcactgcgcccgctgccagagaaattccacggtctgact
gaccaagaaatgcgttaccgccagcgttacgttgacctgatcgtcaacgaaaactctcgc
aacgctttcattgtacgttctaaggtgatgtcagccattcgtaacttcatgatctcaaaa
cagttcatggaagtggaaacgccgatgatgcacgtgatccctggtggtgctagtgcgcgc
ccattcatcacgcaccacaacgcgctcgacatgccgatgtacctgcgtatcgcgcctgag
ctgtacctgaagcgtctggttgtcggtggttttgatcgtgtattcgaaatcaaccgtaac
ttccgtaacgaaggtctttctccacgtcacaacccagaattcaccatgatggaattctat
atggcgtacgcggactacaaagatctgatggatctgacggaagagctgctcagctctgtg
gcgttagaagttctcggttcaacctccatgccttacggtgagcataccgttgaatttggt
ggtaaatacgcgcgtatgagcatgtttgatgcgatcaagcactacaacccaaatcacgcg
cagatccaagctctgaccgaagaagacatccaaaaccgtgacctcatggtttctatcgcg
aaatccgttcacgttgatgtggagcctttctggacctgtggtcagcttctcgaagagatc
tttggtgaaacggctgagccgaaactgatgcagccaactttcatcactggctacccagca
gatatctctccactggcacgtcgtagcgatgacaacccgttcttcactgaccgctttgag
ttcttcatcggtggccgtgaagtggcaaacggcttctcagagctgaacgatgctgaagac
caagatgcgcgtttcaaagcccaagtggaagcgaaagagtctggtgatgatgaagccatg
ttctatgatgccgactacattaccgctttagagcacggcttaccgccaacagcgggtcaa
ggtattggtattgatcgtctggttatgctcctgaccaatactcacactatccgtgatgtg
attttgttcccagcgatgcgccctcagcaataa
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