Vibrio cholerae O1 MJ-1236: VCD_000004
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Entry
VCD_000004 CDS
T00903
Name
(GenBank) glycosidase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj00500
Starch and sucrose metabolism
vcj01100
Metabolic pathways
vcj01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VCD_000004
Enzymes [BR:
vcj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
VCD_000004
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF5696
UxuA
Motif
Other DBs
NCBI-ProteinID:
ACQ61974
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Position
2:1990..3390
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AA seq
466 aa
AA seq
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MKSSYVVLCATFAAASFTSSVQAEAILHAFNWKYADVTANAAQIAAAGYKKVLISPALKS
SGNEWWARYQPQDLRVIDSPLGNKTDLQTLIKTLQDYGVEVYSDVVFNHMANESWKRSDL
NYPGSEVLASYTNQAYYYQQQKLFGDLSHNLFSQNDFHPEGCITDWGNPGHVQYWRLCGG
AGDRGLPDLDANAWVINQQRAYLQALKQMGIRGFRIDAVKHMSQYHIDQVFTPEIISGMH
VFGEVITSGGQGDGSYDAFLAPYLNNTTHAAYDFPLFASIRAAFSYQGSMSQLHDPQAYG
QALPNARAITFAITHDIPTNDGFRYQILNPQDEQLAYAYLLGKDGGTPLIYSDDLADHED
KDNGRWANVWNQPSMQHMLRFHNAMQGKPMTVMYSDSCLMLFKRGKEGVVGINKCGESKN
VTIDTYQHEFNWYQTYQDTLSDDRFSVSSRYHTLTIPARVARMWML
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatcgtatgttgttctttgtgccacattcgcggcagcaagttttactagcagc
gtacaagcagaagccattttgcatgcttttaactggaaatatgcagatgtcactgcgaat
gcagcacagatcgccgccgcaggttataaaaaagtgctgatctcaccagcattgaaatcc
agcggcaatgaatggtgggctcgttaccaacctcaagatctgcgagtcattgactcacct
cttggcaacaaaaccgacttacaaacactgatcaaaacgctgcaagattacggtgttgaa
gtatattcggatgtggtgtttaaccatatggcaaacgaaagttggaagcgtagtgatctc
aattatccgggcagcgaagtactagccagctacactaaccaagcttattactatcaacaa
cagaaactgttcggtgatttgtcgcacaatctcttctcacaaaatgatttccatcctgaa
ggttgtattactgattggggcaaccccggtcatgttcagtattggaggctatgcggtggc
gcaggtgatcgcggtctaccagacttggatgccaacgcttgggtcatcaatcaacagcga
gcctatttacaagcgcttaagcaaatgggtatcagaggatttcgaattgatgcggttaag
cacatgagtcaataccacattgaccaagtcttcacaccagagattatttcgggcatgcat
gtgtttggcgaagtgatcacaagtgggggtcaaggtgatggcagttatgatgccttccta
gctccttatctgaataacaccacacacgccgcatacgactttcctctatttgcctccatt
cgtgccgcattttcttatcaaggttcgatgagtcaattgcatgatccacaagcctatgga
caagcattaccaaacgcccgcgccatcacgtttgcgattacccatgatattcccactaat
gatggattccgttatcagatcctcaacccgcaagatgagcaactcgcttacgcttatcta
ctcgggaaagatggtggaacaccgctgatttatagtgatgatctggctgatcacgaagat
aaagataatggtcgttgggcgaatgtttggaatcaaccatcaatgcaacatatgctgcgc
ttccataacgcaatgcaaggtaaacctatgacggttatgtatagcgactcatgtttgatg
ctcttcaaacggggtaaggaaggtgtcgtaggtattaataaatgtggtgagtcaaaaaat
gtcaccatagatacttatcagcatgaatttaactggtatcagacctatcaagatacttta
agtgacgaccgttttagcgtgagcagtcgctaccatacgttaactatcccagcacgtgtt
gcgcgcatgtggatgctgtaa
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