Vibrio cholerae O1 MJ-1236: VCD_002900
Help
Entry
VCD_002900 CDS
T00903
Name
(GenBank) hypothetical protein
KO
K12531
ATP-binding cassette, subfamily B, bacterial RtxE
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VCD_002900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcj02000
]
VCD_002900
02044 Secretion system [BR:
vcj02044
]
VCD_002900
Transporters [BR:
vcj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VCD_002900
Secretion system [BR:
vcj02044
]
Type I secretion system
RTX toxin transporter
VCD_002900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
Peptidase_C39
SMC_N
AAA_22
AAA_18
AAA_21
AAA_29
MeaB
Tmemb_9
ABC_ATPase
PRK
Rad17
RsgA_GTPase
AAA_28
SbcC_Walker_B
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
ACQ61060
LinkDB
All DBs
Position
1:2098674..2100839
Genome browser
AA seq
721 aa
AA seq
DB search
MNTRFTTDAHRLAEQTLPQESPRTNWGIEAVVYAGQQFHKKSTSSQLKHALGVSYANLTD
MEMREAADYLGLKSQITKLSIQAFNTLPLPALIEYQGGWKVMIQTDDNGWTAYDPATDSL
HTLSFTSAESTAHYKVMLIADESLSVKEVKFGLSWFAPSILRQKSQLRDVFLYAIALQIF
ALVSPMLFENVIDKVLVGRSLSSLHVLALAMLALAIAEPAYSYLRNTVFGHLASQVNAEL
SGRLYRHLVGLPLTYFKQRQTGQIIARVREMAQIRQFLTGSTLMLLLDLIFVTVFLAVMF
HYASTLTWLVIGSLVIYFVLWLIAGPLIRKKVESEYESDANATTFLTEAVTGIETIKTTA
TEHRFLEQWQRILSQQLNRSFDAQKSGLIAGQAIALVQKLTAALLLWWGVSAVLKGEITP
GQLVAFNMLAGHVTQPVLRLAQIWQDFQHTLIALRRVGDILDEPRENSKQGLASVPELDG
GIEFSNIRFRYHQDAPEVLANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQV
LVDGMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALA
FIEGLPHGFNQPVGEKGAALSGGQRQRIALARALLVNPRILLLDEATSALDYNSEASIMS
NMDEICRGRTVISIAHRLNTIRHADNIFVLDKGQVAESGTHEELLAQQGLYAKLWTQQVG
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccgttttacaaccgacgctcataggcttgctgaacaaacgttaccacaagag
tctccaagaactaattggggtatcgaagctgtggtctacgcaggtcagcaatttcacaaa
aaatcgaccagctcgcaactgaaacacgcgctaggggtaagctacgccaatctcactgac
atggaaatgagagaggccgccgactatcttggcctgaaaagccaaataacaaagcttagt
attcaagcgttcaatacgctgccactccccgctcttatcgaatatcagggtggctggaaa
gtgatgattcaaaccgatgataacggttggacggcctacgatcctgcaaccgactctctg
cacacactctcgttcacatcggctgaatccaccgcgcattacaaagtcatgctgattgcg
gatgagtctctgagcgtcaaagaggtcaaatttggtttaagctggttcgccccttccatt
cttcgccaaaaaagccaactgcgagatgtgtttctttacgccatcgcgctacagatattt
gcgctggttagcccgatgctgtttgaaaatgttatcgataaagtgctcgtgggacgaagc
ctatcaagcttgcatgtgctggcgctggcgatgttagcgttagcgatagctgagccagca
tacagctatttacgcaataccgtatttggccatcttgcaagccaagtgaatgcagagctg
tcaggccgactctatcggcacttagtcggtctgccattaacctatttcaagcagcgccaa
actgggcaaatcattgcgcgagtgcgtgaaatggcgcaaatccgtcagtttctgacgggt
tcaactttgatgctattacttgatctgatttttgtgacggtttttctcgctgtcatgttc
cattacgccagtacactgacttggttagtgattggctcgcttgtgatttattttgtgttg
tggctgattgcaggaccgctgatccgcaaaaaagtggaatctgaatacgagtccgacgct
aatgccacgacgtttttgaccgaagccgttactggtattgaaaccatcaaaacgaccgcg
acggagcatcgctttcttgagcagtggcaacgtattcttagccagcaactaaaccgtagc
tttgatgcacaaaaatcggggctcatcgctgggcaagctatcgctctggtgcagaagctg
actgcggcactgctgctttggtggggcgtgagcgcggtactcaaaggtgaaatcactccc
ggtcagctagtggccttcaatatgctcgcaggccatgtgactcagcccgttctgcgactg
gcacaaatttggcaggattttcagcacactcttatcgcactgagaagggttggcgatatt
ctcgatgaaccgagagaaaacagtaaacaaggcttagcgtccgtgcccgaactcgacggt
ggcattgagtttagtaacattcgctttcgttaccaccaagatgcccctgaggtactggcc
aatctatcactcaagatcaaaccggggcaatttatcggcgttactggaccatcaggttca
ggcaaaagcacactcactcgcctgttgcaacgcttgtacgttccgcaacatggccaagtg
ctggtggatggaatggatcttgcgattgcggatcccgtgtctctgcgccgcaatatgagt
gtggtactacaagagagcattcttttttccggaagtgtggcggacaatattcgtttatgt
aaaccgcaggccagcgatgaagaaatccgtcatgccgctcaattagcaggtgcgttagca
tttattgaaggacttccccacggctttaaccaaccggttggggaaaaaggtgcagcgctt
tcgggaggtcaaaggcaacgtatcgccttagcgagagccttgctggtcaatcctagaatc
ttactgctggatgaagcgacctctgctctcgactacaattctgaagcgtcaatcatgagc
aatatggatgaaatatgtcgtggtcgcactgtgatcagtattgcccatcgcctcaatacc
atccgccatgctgacaacatctttgtcttggataaaggacaagtcgccgaaagcggtaca
catgaagaactgcttgcccagcaagggctgtacgccaaactttggacgcaacaagtggga
gaatag
DBGET
integrated database retrieval system
