Vibrio cholerae O1 LMA3984-4: VCLMA_A0599
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Entry
VCLMA_A0599 CDS
T01871
Name
(GenBank) Transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcl03000
]
VCLMA_A0599
Transcription factors [BR:
vcl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VCLMA_A0599
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AEA77884
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Position
I:678519..679409
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AA seq
296 aa
AA seq
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MSHLNYNHLYYFWMVCKQGSVTKAADALFLTPQTVTGQIKALEDRLDGKLTKRNGRSIEP
TELGQLVFKYADRMFGLSYEMLDIVNYSQRSNLLFDVGVADALSKRLVSKILLTSVPGDN
RIHLRCFESTHEMLLEQLAQHKLDMILSDCPVDSSQSPGLFSKKLGESRMSFFSFGDVDF
APFPAVLQSKKLLVPGSRTAMGRKVRQWFDRQGLQPHILGEFDDSALMKAFAIYHSDAVF
MAPSFYVSEVDAESSLKLIGHVDEIKEEYYVIFAERMIQHPAVKNVCDADFTNLFL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatcttaactataaccacctctattatttctggatggtgtgtaaacaaggctcg
gtaaccaaagcggccgatgctctgtttttaacgccccaaaccgtgactgggcagatcaaa
gctttggaagatcgacttgatggtaagttgacgaaacgtaatggccgcagtattgagccg
actgaattgggacagttggtctttaaatacgctgatcgtatgtttggcttgagttatgaa
atgttggatatcgttaactatagccagcgttcaaacttgttgtttgatgtgggggtggca
gacgccttatccaaaagattggtgagcaaaatattgctgacctcagtacccggagataat
cggattcatctacgctgctttgaatcaacccatgagatgctattagagcagttagcccag
cataagttggatatgatcttatctgattgcccagtggattcgagccaaagtcccggctta
tttagtaaaaaactcggtgagagtcgcatgagttttttcagctttggtgacgtggatttt
gcgccattccccgcggttttgcagagtaaaaaattgttagttccaggcagtcgaaccgca
atggggcgtaaagtgcggcagtggtttgatcgtcaagggttacaaccacatattctcggt
gaatttgatgactctgctttaatgaaagcgtttgctatctatcacagtgatgccgtgttt
atggctccttctttttatgtctcagaagtggatgcggaatcatcattgaaactcatcgga
catgtggatgagattaaagaggagtattatgtcatcttcgctgaacgcatgatccagcac
ccagcagtaaaaaatgtctgtgatgctgattttactaacttatttttgtga
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