Volvox carteri f. nagariensis: VOLCADRAFT_103843
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Entry
VOLCADRAFT_103843 CDS
T01330
Symbol
vmp3
Name
(RefSeq) metalloproteinase, extracellular matrix glycoprotein VMP3
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M11
Motif
Other DBs
NCBI-GeneID:
9623997
NCBI-ProteinID:
XP_002948377
JGI:
103843
UniProt:
D8TPL0
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MWQKALPTLLLLVAAAQVARGAPGPSSNAPGQSSNAPGQIKKQTLQGQMAYVTLDNGEEQ
WAIVNDQDKKVTPLTKGYKPPKDKDKDKKDKDFEPGTVVSLDCDIDASGTCTPSAGATTN
IVAAVPAITPVVYQRLLVIILNYSSCGYSATATEDAVRSVFLGPNGDGTGGVAQKYTQCS
YGKFNLNTTAFQTVVVYPACSTAATAQCSWWTLSNDGDTAAKAVLGTTAFSGFTHYAYVV
PPGIPCGWAGLALLPGKQIWLATMNYGVYRWATIMQEAIHNYGLWHSWQNGWEYEDYSTA
MGRGDACPNAAEISRMGWATPAPGGGAISSASFAPGSALAFALPATYLTGDGNYLRVVPD
WLPTYSNNTLAKNLYIAVRVPKSGDAALTATYSPKLNIHEVNATMDNAYPASYQNSDRKI
SFVRAISSTVRANLTAYQLVVYAASWVGPDTLRVYLCRYDVSPDECPPLSVLETLPSAPP
SPPPPSPPPPRPPPPSPVPPTPPPSPRPPPSPRPPNPPPRPPSPRPPPRPPPRPPSPRPP
PPDPSPPPPSPPSPPTSPSPPDPAWPNLPTSPDPPSPNPPSPDPPSPDPPSAPPPSPPPP
SPPPPNPPPPSPPPPNPPPPSPPPPSPPPPSPPPPNPPPPSPPPPSPRPPTPPPPSPPPP
RPPPRPPPTRRSPPPTSSPPPPVAAFIGGDSSTVAASDQPPLQRRRLHQ
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagaaggcgcttccgacgcttttgctgctcgtcgcggccgcgcaggttgcgcga
ggggctccaggcccatcaagcaatgctccaggccaatcaagcaatgctccaggtcaaatc
aagaagcaaactttgcaaggtcagatggcttacgtcactctggataatggcgaagagcag
tgggctattgtcaacgatcaagacaagaaggtcacaccccttacaaagggctacaagcca
cccaaggacaaggacaaggataaaaaggataaggatttcgagcccggaacggttgtaagc
ttggactgtgacatcgatgctagcggcacttgcacaccgtcggcgggcgccacaacaaat
attgtggcagcagtgccggcgattacccctgtagtctaccagcggctgttggtcatcatc
ctgaactactcgagctgcggctattccgcgacagccacggaggatgcagtacgcagcgtc
ttcctggggccaaacggtgatggcaccggtggcgttgcgcaaaagtacacgcaatgctcg
tacggcaagttcaaccttaacactacggcattccagacggtggtcgtctacccggcctgc
tccaccgctgccacagctcaatgcagctggtggactctttccaatgatggcgacacggct
gccaaggccgtactgggtaccactgctttcagcggtttcacccactatgcctacgtcgta
ccgcccggaatcccatgcggctgggcggggttggctctgctgccaggaaaacagatctgg
ctggcaaccatgaattacggtgtataccgttgggctacgatcatgcaggaggccatccac
aactatggtctgtggcactcctggcagaacggctgggagtacgaggactactcgaccgcc
atgggccgtggtgacgcctgccccaacgccgccgagatctctcgcatgggctgggccaca
cccgcaccaggcggcggggccatcagctctgcttcgtttgctccaggttccgcacttgcc
tttgccctgcccgccacctacctcactggcgacggcaactacctgcgagtggtgcccgac
tggctgcccacctacagcaacaacacgcttgctaagaacctctacatcgccgtgagggtt
cccaagagtggcgatgccgcccttaccgccacatactcacccaagctcaacattcacgaa
gtcaatgcaactatggacaatgcttacccagcctcataccaaaacagcgaccgcaagatc
tctttcgtccgggcaatctcctccactgtaagggccaatttgacagcctaccagctggtg
gtttacgcggcatcctgggtgggcccagacactttgcgtgtctacctctgccgatacgat
gtctcgccggatgagtgccccccactttccgtgcttgagacgctcccatcggcgccgccg
agcccgcctccccccagcccgccgccgccacgaccaccgcccccgagccccgtgccgccc
accccgccgccgagcccacggccgcctccaagtccgcgaccgcccaacccaccccccagg
ccgccgtcgcccaggccgccgcccaggccgccaccaaggccgccgtcacccaggccgcca
ccccctgacccgtcacccccgccgccgagcccaccatcacctccgacgtcgccgagccct
ccagatcctgcatggcctaacttgccaacaagccctgacccgccaagccccaatccgcca
agccctgacccgccaagccccgatccgccaagcgcaccgccgccaagccctccacctcca
agcccaccgccgccaaaccctccaccaccaagcccaccgccgccaaaccctccaccgcca
agcccaccaccgccaagccctccaccgccaagcccaccgcctcctaacccaccaccgcca
agcccgccgccgcctagtccacggccgccgacgcccccaccgccaagcccaccgccaccc
cggcctccgcctcgtcccccaccaacgcgtcggtcgccgccaccgacatcgtcaccaccg
ccgccggtagcggcgtttatcggtggcgacagctcaacggtagccgcgtcagaccagccc
ccgcttcagcgccgccgactgcaccagtaa
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