Volvox carteri f. nagariensis: VOLCADRAFT_104262
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Entry
VOLCADRAFT_104262 CDS
T01330
Symbol
vmp1
Name
(RefSeq) metalloproteinase, extracellular matrix glycoprotein VMP1
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M11
Motif
Other DBs
NCBI-GeneID:
9623902
NCBI-ProteinID:
XP_002949197
JGI:
104262
UniProt:
Q8S9B4
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MRSPHVLLFALLAIVVAEGASLLPGKPIRGPPPASPQVAVGQTVDLVGQLTLVNTHDNKA
RYALIDAEGVVTPFSADFVLPEGDKDNNPLETGSIVGMKCEVGPPKYCGCGDIGGNCTCP
DDANTPACVAAAQSTISLVMSAAQVLPFAPAPHGTQQKLLVMILDYGSCGYAPSLTENDI
RNLYLGPNKDGLGGIALKYSDCSYGKFGLNTTAFMAVRVSINCSTAVTSSCSWWAISQGA
DAAAKSLIGLAAFSTFSHFTYVLPPGLQSVCAWAGLALLPGRQTWLQSSGYGVQRWATVM
QEGIHNYGLWHSWRNGWEYEDYSTAMGRGDACPNVAETSRLGWATPAVGGGAINSGVLKT
AGSVAKWSLPATYITGDGNHLRVLPDWLPGYTNSTLAKNLYLALRVNKLGDAALGSMYAN
KVNVHEVNATMDNGYPNSFIYSDRRIQFISSVSPFTRSVLPAYNLVIYTSAVNASDAITV
YLCRYTSADSQCPSLTDVVGTASPPPPSPPPPARPPPSPPPPARPPPPPPTRSPPPLTRS
PPPLKKSPPPSPRKPPPSPRPSPPTVGH
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcggtctccacacgtcctgcttttcgctttgctagccattgtggtagctgaaggggcc
agcctgcttcctggcaagcctatcaggggcccccctccggcctctccccaagtggctgtt
gggcaaaccgttgatctcgtgggacaactcactttggtaaatacccacgacaacaaggcc
cgatatgctttaatcgatgccgagggagtggtgaccccgttcagcgcggatttcgtgctg
ccggagggcgataaggacaacaatcccttagaaacaggctccattgtcggaatgaaatgc
gaggtgggccctcccaagtactgtggctgtggagacataggtggcaactgcacatgcccg
gacgatgcgaacacaccggcatgcgtggccgcggcccagtctacaatcagcctcgtgatg
tcagcggctcaagtcctgcctttcgccccagcgccacatggcacccagcagaagttgctg
gtgatgattttggattatggttcttgtggctatgcgccgtccttgacagagaacgacatt
cgcaacctgtacttggggcccaacaaggatggcctaggcggcatcgcgcttaagtactcc
gactgctcatacggcaagtttggcctgaacacaactgccttcatggcggttcgcgtcagc
attaattgctctaccgccgtcaccagctcctgcagctggtgggccatttcccagggtgcc
gatgccgcggccaagagtctgatcggccttgcggctttctccaccttctcgcacttcaca
tacgtgctgcctccggggttgcagagcgtgtgcgcctgggcgggcctggctttgttaccc
gggcgccagacatggctgcagagcagcggctacggagtccagcgctgggcgacggtgatg
caggaaggcattcacaactacggcctgtggcactcctggcgcaacggctgggaatacgag
gactactcgaccgccatgggccgtggagatgcctgccccaacgtcgcggagacatcccga
ctgggctgggccacacccgccgtcggcggtggcgccattaactccggcgtcctgaagacc
gccggcagtgtcgccaaatggtctctgccagccacctatatcaccggtgacggcaaccac
ctgcgtgtgctgccggactggctgcctggttacacaaacagcacattggccaagaacctg
tatcttgcactccgcgtcaataagcttggcgacgccgcgcttggcagtatgtacgccaat
aaggttaacgtccacgaggtcaacgcaaccatggacaatggctatccaaactctttcatc
tacagcgaccgacggattcaattcatcagttccgttagccccttcacgcgctccgtgctt
cctgcctacaacctcgtcatctatacaagtgctgtgaatgcaagcgacgctatcacggtt
tacctctgtcgttacacttccgcggatagtcagtgtccgtctctaactgacgtggtgggg
accgcctccccgccgccacccagcccgccgccaccggctaggccgcccccgtcaccgccg
ccaccggccaggccgccaccgccaccgccgaccaggtcgccgccaccgctgaccaggtcg
ccaccaccgttgaagaagtcgccccccccctcgcctaggaagccgccgccgtcacccagg
ccgtcaccacccacggttggacactga
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