Volvox carteri f. nagariensis: VOLCADRAFT_104499
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Entry
VOLCADRAFT_104499 CDS
T01330
Name
(RefSeq) hypothetical protein
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAST_1
TFIIA
DUF6548
RNA12
EIIBC-GUT_N
THOC2_N
Motif
Other DBs
NCBI-GeneID:
9619204
NCBI-ProteinID:
XP_002949851
JGI:
104499
UniProt:
D8TU07
LinkDB
All DBs
Position
Unknown
AA seq
1495 aa
AA seq
DB search
MDPGCRRPPSAVAQHAGGLVLPWPQPQAQVRSLPQSLLCKAHAAQVSSSHALVPASWPSP
FAASTSPDESPDSSWRPAAAIRLAGAPPSSPSSSSLWPPTSPSAGGKALTPPGGRPQEVG
TGDSGIGPVRSGSGFSRELGQGSRADMYGRPRKRPALGAEAAVALARVAEGAAAANRCRA
VQGVGPWEGSGSDGGGGGGGGGGSAEFLFLSHPAKVMRAIKGCGSVGELYRLYRIAQDRI
APADLSTSSSASYGSTTVTTGSRGAGEGPMVCSAAAGDAGSGGGGGVLNDLHLVAVLTHL
AQLAAAELPASGGRRRRGGGAAAAAAVGAVDMAAFGWEVAMAIGVRLAAGSEVLSQPRAA
SNSMWAAAKLGLTLRAAWWEALAAPLLAAATPPPPPPPGSNAVGVAATGWLPPLPCSGRD
LCNSVYALGVAAAAATTCGGGGGGITYGDSNSGLMAASGAARRFEARLRSVGAELLEACS
ANRLRVVANVLWALQRFDCRTPPADLVTALLQAGKSMMSYTAAASVEATDGVDGSWLRGG
PQAQQQQQQPPPPPPPPPMLQLRPPAQYVCQPSQGSLAPHQAQESKQQQEQQQQEQQQQE
QQEQQQEEQEQQQQLGKRLLSADMLVTVVWSVGRLKSLGALHVEGNRHAAPRQPYLGKQQ
QQQQLLAGAAVGGSSNIDGGEISAAVYDGFLEAATDAAVGVLRRQLAAAAAPPPGDRTRW
AATAAAAAAAAHLGPRSLAALANGLALLQVAPGNGGGGGDSVGLATATQTVADVASGRIG
GGGGGGCSDAVLVGTVWALAKLRYLPPQELLAALAVAVRGRISRLPPSSLAQLLWSLAAL
QQLDPSLESGGGGGGGGGGGGILTLAPGLQRRIRAAVERTCGTVAVGGGEGVIVRAVTPP
GEDAGGNVVLAAAAVDPVLPTRDGGGGGGNCRVAAPLPPRTVVQLAGSLQRLRVPMPPML
PYRMAATLVRPAVQQLTQEMREQQRQLSYSGGRPSDLGEASATTVAVADKLYDSVRLLGA
LASAMAGLQHTSRPPGGSRFWRSRLPPRRSRGIGSGAGPCPLPADLRRTGLRLALWNAGR
AAVRAAAAAAEMKHGPPLVALRDWCAYLAGLRRLGFHLAPDLATAVLEHLSKRGQLAQLA
RCSARELVSLACELSYIAVRMYGPSDKYGVPMQYVLRRPRRLAPRIAAPPLRLWDPSDDE
LQRPSPAATPLAAGGADSPHQEGSRRVARALPQLTDAARAAPWMRDVVQQRLRGGGDRSV
YRTRVGGRTKTRAAAPPPPPPLEGPGSTGRVKERRHYQQPQHLLSGTGAVRPYGYNPNAA
ALYGGAGGANSNGNGTGGGGRPRAPTAAVALSGGQVVALSYSLARHPPPRPPPDRWMRLM
LLAWFLGGPTLSPRADVTYDNPSKAVEADLDALGARDCADLCVSLVRLGCVPGGDWLDRF
GVQGPEFIYVQFEVLEIPEEEVSLMAREQPLGGTVPYDDEEESRLEKKIAWDRTE
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggctgcaggcggcctccgagcgccgttgcccagcatgccggcgggctggtc
ctgccatggcctcaaccccaggctcaagttcgctccctgccgcagtccctcctatgcaag
gcacacgcagcacaagtctcatcatctcatgcgctggtgcctgcctcgtggccatccccg
tttgccgcgtccacgtctcccgatgagtccccagattcttcttggcggcccgcggcggcc
atcaggttggcaggcgcgccgccgtcgtcgccgtcgtcctcgtcgttgtggccgccgaca
tcgccgtcagctggcggcaaggcgctgactccccccggggggaggccgcaggaagttgga
accggtgactcggggatagggcccgtcagatccggatcgggcttcagccgcgagttaggt
caaggttcccgggctgacatgtacggcaggccacgtaagcggcctgcgctgggcgccgag
gcggcggtggcgttggcgagggtcgccgaaggtgctgcggcggctaatcgctgtcgcgcc
gtacaaggtgtcggaccttgggaaggcagcggcagtgatggcggtggaggaggcggagga
ggaggaggtagcgccgagtttctgtttctgagtcacccggctaaggtgatgcgggccatc
aagggctgcggtagtgtaggagagctgtaccggctgtaccgcatcgcgcaggaccgcatc
gcacccgcggacctgtccacaagcagcagcgcatcgtacggcagtacgacggtgaccacg
ggaagcaggggtgcaggggagggccctatggtttgctctgcggcggcgggtgacgccggc
agtggcggcggcggcggcgtgctcaacgatttacatctcgtagccgtacttacacatctg
gcgcagctggcggcagcggagctgccggcctctggcggccgccgccgccgcggcggcgga
gccgccgccgccgccgccgtgggggcggtggacatggccgcattcgggtgggaggtcgcc
atggccatcggagttcgcttggcggcgggatccgaggtcctttcccagccgcgtgccgcg
agcaactccatgtgggcggcggcgaagctgggccttaccttgcgggcggcgtggtgggag
gcgctggcggcgccgctgctggcggcggctacaccgccgccgccgccgccgcccgggtct
aacgctgtcggcgttgctgctactggatggctgccgccactgccgtgttctggaagagac
ctctgcaactccgtctacgcgctcggagtggctgcggcggcggcgacgacgtgtggcggc
ggcggaggaggtattacgtacggcgacagtaacagcgggctgatggccgccagcggcgcg
gcgcgccgcttcgaagcccggctacggtccgttggcgctgagctgctggaggcctgcagc
gcgaaccgattgcgggtggtcgccaatgtgctctgggcgctgcagcggttcgactgccgt
acgccgccagccgatttggtgacggcgctactgcaggcgggcaagtccatgatgtcgtac
acggctgccgcttcggtggaagcgacggacggggtggatgggtcatggctgcgaggcggg
ccgcaggcgcagcagcagcagcagcaacctccgccgccgccgccgccgccgccgatgcta
cagctgcggcctcctgcgcaatacgtgtgccagccgtcccaggggtcgctggcaccgcac
caagcgcaagagagtaagcagcaacaggagcaacagcagcaggagcagcagcaacaggag
caacaggagcagcaacaggaggaacaggagcagcaacagcagctcggtaagcggctgcta
tccgccgacatgctcgtcaccgtggtatggtccgtgggccgactgaagagcttaggggcg
ctgcacgtggagggcaaccggcacgcggcgccacggcaaccctatttgggtaagcagcag
cagcagcagcagctcctcgcgggcgctgccgttggcggcagcagcaatatcgacggcggc
gagatatccgcagcggtgtacgacggctttctggaggcggcaacggacgctgccgtcggt
gtgctgcggcggcagttggcggcggcggcagcgccgcccccgggggacaggacacgctgg
gcggcgacggcggcggcggcggcggcggcggcacatctgggccctcggtccctggcggcg
ctggcgaacggcctggcgctgttgcaggttgccccgggcaacggcggcggcggcggcgac
agtgtggggctcgccacggcgacccagacggtggctgacgtcgcatcaggccgtatcggc
ggcggcggcggcggcggctgttcggatgccgtactggtcggcaccgtgtgggccctcgcc
aaattgcggtacctgccgccacaggagctgctggcggcgctggctgttgccgtacgcggg
cgcatcagtcgcctgccgccgtcctccctggcgcagctgctgtggtccttggcggcgcta
cagcagctggatccctccctggagagcggcggaggtggcggaggcggaggcggcggcgga
ggcattctgacgttggcgccggggctgcagcggcgaatcagggccgccgtggaacggacc
tgcggtactgtcgccgtcggcggcggggaaggtgttattgtacgggcggtgacaccgccg
ggggaggatgcgggggggaatgtcgtactggcggcagcggcagtggaccccgtgttgccg
acgcgagatggcggcggcggcggcggcaattgcagagtggcggcgccgttgccgccgcgg
acggtggtgcagcttgcgggctctttgcagcggctgcgggtgccgatgccgccaatgctg
ccgtaccgcatggcggccacgcttgtacggccggccgtacaacagctgacgcaggagatg
cgggagcagcaacggcaattgtcgtacagtggcgggaggccgagcgacttgggggaggcc
tccgcaacgacagttgccgttgcagataagttgtacgacagtgtacggctgctaggcgcg
ctagcgtcggcgatggcgggcttgcagcacacctcccgcccgcccggcggatctcgtttc
tggcgaagccgcctccccccccgccgcagtcgtggcattggttccggagccggtccatgt
ccactccctgccgacctacgacgcacgggattacgcctagcgctgtggaatgcggggcgg
gcggcagtgcgggcggcggcggcggcggcggagatgaaacacggtccgccgctggttgcc
ttgcgggactggtgcgcctatctggcaggtttgcggcgtctgggcttccacctggccccc
gacctggcgacagccgtactggagcacctgtcgaaacgtgggcagctggcgcagctggcg
aggtgcagcgcgagggagctcgtttcgctggcctgtgagctgtcgtacatagccgtacgg
atgtacgggccgtcggacaaatacggtgtgccgatgcagtacgtcttgaggcgaccaagg
cgccttgcacctcgtatcgcagcgccacctctccgattgtgggatccaagcgatgatgag
ctgcagcgcccatccccagccgccacgcccctggccgctggaggagcggactcgccgcac
caagaggggtcacgtcgagttgcacgagcattgccacagctgacggacgcggcgcgagcg
gcgccctggatgcgtgacgtggtgcagcagcgcctgcgcggcggcggcgacaggagcgtc
tatcgcactcgcgtcggcggtcgtacaaagacccgtgcggcggcaccgccgccgccgcca
cctctggagggccccgggtcaacaggccgggtcaaggagcggcggcactaccaacagccc
cagcatctactcagcggcacgggcgctgtacggccgtacggatacaatcccaacgcggcg
gctttgtacggcggcgctggtggagcgaatagtaatggtaatggcactggcggcggcggt
cgtcctagggcgccgacggcggcggtggcgttatctggggggcaggtggtggcgttgtcg
tactctctggcgcgccatccgcctccgcggccgcccccggatcgctggatgcgtctcatg
ctgttggcctggttcctagggggaccgactctttctccacgtgccgatgtaacgtacgat
aacccctcgaaggccgtggaggctgacctggacgccctgggagcccgcgactgcgccgac
ctgtgcgtgtccctggtgcggctaggctgcgtgccggggggagactggctggacagattc
ggagtacagggcccggagtttatttatgtgcaatttgaggttctagagatcccagaggag
gaggtgtcattgatggcccgcgagcagccgctgggtggtaccgtaccgtacgacgatgaa
gaggaatcccgtttggagaagaagatagcatgggatcggacggagtag
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