Volvox carteri f. nagariensis: VOLCADRAFT_106281
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Entry
VOLCADRAFT_106281 CDS
T01330
Symbol
phV40
Name
(RefSeq) extracellular matrix glycoprotein pherophorin-V40
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3707
Motif
Other DBs
NCBI-GeneID:
9624180
NCBI-ProteinID:
XP_002954263
JGI:
106281
UniProt:
D8U6B9
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MHYVAVVTLCLAAAFAAARAQILPADLIQSGLYPNFPFCNCNKGASPYSLSPTVTSYGNG
TFCFTLNVRPVAGGTSYCATKADVRKIEFNVRQDCDIDGTIVKSTINGIYTVVGPSFSLA
PQGPTGSMVLRLTQLGLGFDSDGAQICLTLISKAPGRGCTTLEQLCEPPSRAPPGVCSTA
LFDTNVDCCPISRLSIPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPRPPPPSPPPPR
PPPPPPPSPPPPPPPSPPPPPPPSPPPPPPPRPPPPPPPSPPPPPPPSPPPPPPPSPPPP
PPPPPPPPPPPPPPSPPPPPPPPPPPCLSCVYVTLDPPASAVFRIVFTPDDCTRIADRIV
ADVKAEAATYGSILIGEPVSTCNDRYIKVCFNFVSDPVAAQLQPFVSNQVSFWLNEALGA
PACPAYLANYKVTVKVAPDGDPFNTPTGGCLDALTSVACNAGSINYPKCVCNTRQASTSF
AVIPFMNKYPGRKNYTNLYCFSIAVVTPTAPNSACGKTTTLRSVEFWADDTQRARVKGMG
VMPKGATTMTYLSESWGPVGDDTLKSPVLNWNKAQADGAMVCLEVEYITNLDTFCKYGHG
TCWLNLFNDDKSCCPLYSATLL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcactacgttgcggtggtgaccctctgcttggcagccgcttttgcggctgcccgagcg
cagattctacccgccgacctcattcagtccgggctctacccgaatttccctttctgcaac
tgcaacaaaggcgcgtcgccttatagcctttcgccaaccgtaacatcatacggcaatggc
accttctgctttacgttgaacgtaaggccagtggctggcggcacctcatactgcgccacg
aaagccgacgtacgcaaaattgagttcaacgtgcgccaagactgcgacatagatggcacc
attgtcaagtctaccatcaatggtatctacaccgtcgttggacctagcttttccttagcc
ccgcagggcccaactggcagcatggtgctccgcctgacgcagctgggtctgggcttcgat
agcgatggcgcccagatttgcctcaccctgatttccaaggcgccaggtcgcggctgcacc
accctggagcagctgtgcgagccgcctagcagggcccccccaggcgtctgctccacagcg
cttttcgacaccaacgtggattgctgcccgatctccaggttaagcattcctagcccgcca
cctccctccccaccgccgccctcgccgccgcctccttcgccgccgccaccgtcaccaccg
cctccttcaccaccgccgccatcaccacggccacccccgccttcaccaccgcctccgcga
ccacccccacccccacctccttcaccaccgccgccacctcccccatcgccacccccgcca
cccccaccgtcaccacctccgccacccccgccacgaccaccaccaccaccccctccgtca
ccacccccaccaccccctccatcgccacctccgccaccccctccgtcaccacccccacct
cctccgcccccaccgccacccccgccgcctcctccgcccccgtccccgccgcctcctcct
ccacctccgccgcccccttgcttgtcctgtgtctacgttaccttggacccacccgccagt
gcagtgttcaggatcgtcttcaccccggatgactgcacaaggatcgccgacaggattgtt
gccgatgtcaaggcagaggccgcaacctacggatccatcctaattggcgaaccagtttca
acttgcaacgacagatacatcaaggtttgctttaacttcgtgtcggatccagtcgccgcc
cagctacagcccttcgtatcgaaccaggtgtccttctggctgaacgaggctctgggcgcc
ccagcctgcccggcctacctggcgaactacaaggtgacggtcaaggtcgctccggacggc
gatccgttcaacacccccacgggcggctgcctggacgcgcttacctcggttgcttgtaac
gcaggcagcatcaactacccgaaatgcgtgtgcaacacccgccaggcatcaacatcattc
gccgtcatccccttcatgaacaagtaccctggtcgcaagaactacaccaacttgtattgc
ttcagcatcgctgtcgtcaccccgacagcacccaacagcgcttgtggcaagacgaccacc
ctgcgttctgtggagttctgggccgacgatacccagcgcgcccgcgtcaagggcatgggg
gtcatgcccaagggcgccactaccatgacctacctctctgagtcatggggtcctgtgggt
gacgacaccctgaagtcacccgtcctcaactggaacaaggctcaggccgacggcgcgatg
gtctgcctggaggtggagtacattaccaatttggataccttctgcaagtacggccatggc
acttgctggctgaacctcttcaacgacgacaagagctgctgcccactctactcggcgacg
ctgctctga
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