KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_116706
Entry
VOLCADRAFT_116706 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K14408  cleavage stimulation factor subunit 3
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    VOLCADRAFT_116706
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_116706
Messenger RNA biogenesis [BR:vcn03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     VOLCADRAFT_116706
SSDB
Motif
Pfam: Suf TPR_14 TPR_19 EthR_C MTH865
Other DBs
NCBI-GeneID: 9625110
NCBI-ProteinID: XP_002948132
JGI: 116706
UniProt: D8TP08
LinkDB
Position
Unknown
AA seq 782 aa
MDRDRERGRGGGRPGPSPGQLLDKVRQLRAKISQDVYDLTGWDQAWEELKSLQLSDETRA
IYEELVAAFPTKADVWCKYSELELAAGNLPGLKAIFQRCLMAVPSLELWALYMKFIRRSN
KSKGADGVVEIRNALEFTLERAGQDINSGPFWQDLLQLLQSAKAGTPEFGALFPQAMVGQ
EDNARMAAVRRVYQQAVTIPHHHLDGLWRDYQRFENDGPNKQFAKKVLDEWSPKYQAAKA
VYRERRKRAAVLSYALWPLPSGKGGLLQDQQAQLWREYLAYERTNPQGLDPPVLLSRVSL
AFDQALICFLYFPDFWLEYAEWHTSCGRPDAAGSALTKGQAALPQCLQLRMLAADLAERT
GSPEQAVAIYEGLALNLEQQQAVTRGSLPAAEGELVWVQYMQLLRRVEGDFHSRKLFLRA
RKWHLGLPAGEHGCWRLYADAALLEWRRGRDAAAARNIFEKGLEDTRIFREPQYAIAYLD
LLCGLGDLDNARALLARVLGDETNAKCVTLWQRYIAFEGMSGDLAAVVEVERQAMAALRG
EEAEQLKSALPLIRCHGDGSGAVGGGGGSGPPGSNIRPPSAYTYSGAAAAGQEPQPLKQL
PPQLGLFINSLPPPQAVEGIVPDVDQVIEALLTMDLTAGTVLQVCLDLESGKTLAHMGQP
QQGGPPPDQPPYPHGHPHMQQEPPGPHFGRPEPGGPPYGGPPGPYGYGQGSPGPGPRGGG
GGGGGYSEPYGDGPPGGPDEYGKRRYQYGYDPNEGGEDDGYDNGYGGGRDLYHQRLRRRM
DQ
NT seq 2349 nt   +upstreamnt  +downstreamnt
atggaccgcgaccgcgagcgggggcggggcggcgggagacctggaccatctccgggacag
ctgctggacaaggttcggcagctgcgggcgaaaatttctcaggacgtgtatgatctgact
ggttgggaccaggcgtgggaggagctcaagtccttacagctatcggacgaaacacgggcc
atatatgaggagctggtcgcagcgttccccacaaaggctgacgtatggtgcaagtattcg
gagctggagctggctgccggcaacctgccgggcctcaaggcgattttccagcgctgcctc
atggcggtgccctccctggagctgtgggccctgtacatgaagttcattcgcagatccaac
aagagcaagggcgcggatggcgtggttgagattcgcaacgcgctggagttcactttggag
cgggcgggtcaggacatcaactcggggcccttctggcaggacctgctgcagctgctgcag
tccgccaaggcggggacaccggagttcggggcgctctttccgcaggcgatggtgggtcag
gaggacaacgcccgcatggcggctgtacggcgtgtttaccagcaggccgtcaccataccc
caccaccacctggatgggttatggcgggactaccagcgcttcgaaaacgatgggcccaat
aagcagttcgcgaaaaaagtcctagatgagtggtcccccaagtaccaggcggccaaggcg
gtgtaccgggagaggaggaagagagcggcggtgctcagctacgcgctgtggccgctgccc
tccggcaagggggggttgctgcaggatcagcaggctcagttgtggagggagtacctggca
tatgagcgtactaacccgcagggtttggatcccccggtgttgctgtcccgtgtatccctg
gccttcgaccaagcactcatctgcttcctctacttcccagacttttggctggagtatgcg
gagtggcacacctcctgtggccgccccgatgctgccggatcggcattgaccaaggggcag
gccgctctgccgcaatgcctgcagttgcgcatgctcgcggccgatctggccgagcgtacc
gggtcgcccgagcaggcggtggccatttatgagggcctggcgctgaacttggagcagcag
caggcggtgacccgtgggtcacttccggctgcggagggggagctggtttgggtgcagtac
atgcagctgttgcggagggttgagggagacttccacagccgcaagctcttcttgcgcgcc
cgcaagtggcatctgggcctcccagctggcgagcacggctgctggcggctgtacgcggat
gcggcgctgctggagtggcgccggggacgggacgcagcggcagcccgcaacatcttcgaa
aagggtctggaggacacccgcatcttccgggaaccgcagtacgcaattgcgtacctggac
cttctttgtggacttggtgacttggacaacgcgcgcgccctgcttgcccgcgtgctgggg
gatgagaccaacgccaagtgcgtgacgctgtggcagcgctacatcgcctttgagggcatg
tcgggtgacttggcggcggtagtggaggtggagcgacaggcgatggcggcccttcgcggg
gaggaggcggagcagcttaagtcggcgctgcccctcatacggtgccacggcgacggaagc
ggcgcggttgggggcggcggcggcagcgggccgcctggctccaacatccggccgccctcc
gcctacacctactcaggcgcggcggctgccgggcaggagccgcaaccgctgaagcagcta
ccacctcagttggggctcttcatcaactccttgccgccaccgcaggctgtggagggtatc
gtgcccgatgtggaccaggtcattgaggcactgctcaccatggacctcacggcagggact
gtgctgcaggtgtgcctggatctggagtccggcaagacgttggcgcacatgggccagccg
cagcaagggggacccccacccgaccagccgccctacccgcatggccatccgcatatgcag
caggagcctccgggaccgcacttcggcaggccggagccaggggggccgccgtacggcggt
ccgccgggaccctacgggtacggccaagggtcccccggaccgggaccgcgcggtggtggc
ggtggcggcggcggctactctgaaccatatggcgatggtccaccgggcgggcctgacgag
tacgggaaacgacgatatcagtacggctacgatccaaacgaaggcggtgaagatgacggt
tatgacaacgggtacggcggcggacgagacttataccaccagaggttacggcggcggatg
gaccaatga

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