Volvox carteri f. nagariensis: VOLCADRAFT_30242
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Entry
VOLCADRAFT_30242 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
VOLCADRAFT_30242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_30242
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
VOLCADRAFT_30242
Chromatin remodeling factors
NuRD complex
VOLCADRAFT_30242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Chromo
Helicase_C
HDA2-3
ResIII
PHD
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
9627732
NCBI-ProteinID:
XP_002953010
JGI:
30242
UniProt:
D8U2P2
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
EDAQKLLCCDGLQQLGCTAVYHMYCLDPPLTRLPAGDWYCPECAHKFRYQDIERVLDYRS
SLLHPPPPPPSTPTPHSTPISTPTPNPHPQPHPHISPGPTRREYHVKWKGESYLHCSWEP
EEGLAKMYRVRGVVCVCWGGGGEGEGGRGLRESREAEEREAEETGEYVHGVNPLWLEVDR
ILAEQKGRAQMEYLVKWKDLGYDQCTWELESDIAGYDAAIQRFRETKWRRGLAGDLDLPP
VKRRRRRLRAAWRMCKSRWGSGTRKWHSTPDFLHGGSLHPYQLEGLNWLYHKYCTGDAVI
LADEMGLGKTVQTIAFLASLHAECCELPHLVVVPLSTMRNWEREFETWAPNLNVVSLAGN
VEARQVRKLKRRMFHSVFFDRASAKKDRVKFHVLLTSYEMLALEAGQLSKGLQYGVLVVD
EGHRLKNKDSKLFQLLTQFDVRHKVLLTGTPLQNHLGELFMLLHFLEPDKFPSRAAFESR
FSSLSQNEDVTQLHALLQPHMLRRLKNDVMKQLPPKMEQLVRVELSPQQREIYRSLLLQH
SSVLVGHRAAVAAAGGATTALKNLMMELRKACNHPFLVAHQAGRGGAGRGGRGRHPTDLD
SLVTHSGKLQLVDKMAMRLRDAGHRLIIFSQFTRTLDLLEEWLVGRGLGYMRIDGTVAGS
ERQKRIDRFNQHPDSYFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDLQAQARAHRL
GQDKPVMIYRLVTRQTIEERMMQVSRKKMMLEHLVVRKMSSGGGGELKQSELDDILRYGA
QELFADEGDEG
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
gaggacgcccagaagctgctgtgttgtgatggactgcaacagctgggctgtacggcagtg
taccacatgtactgcctggatccaccgttgactcggttgcctgctggtgactggtactgc
ccggagtgcgcccacaagttcagatatcaggacatcgagcgagttttggattacaggtca
tcccttctccatccaccaccaccaccaccatccaccccgaccccacactccacccccata
tccaccccaaccccaaatccacacccccaaccccacccccacatctccccaggtcccacg
cgtcgtgagtaccacgtgaagtggaagggtgagagctacctgcactgcagctgggagccc
gaggaggggctggccaagatgtacagggtgaggggggttgtgtgtgtgtgttgggggggg
ggaggggagggggaaggggggagggggcttcgtgaaagtcgggaggcggaggagcgggag
gcggaggagacgggtgagtacgtccatggcgtcaatccgttatggctggaagtagaccgg
atcctcgcggagcagaagggccgggcgcaaatggagtacctcgtgaaatggaaggacctg
gggtacgaccaatgcacgtgggagctagagtcggatattgcgggttacgacgccgccatt
cagcgtttccgggagaccaagtggcggcgggggctggcgggggatctggatctcccgccg
gtaaaacggcggcggcggcggctgagggcagcgtggaggatgtgcaagtccaggtggggc
tccggaacccgtaagtggcacagcacccccgacttccttcacggcggttccctccatccg
taccaactggagggcctcaactggctgtaccacaagtactgtacgggagatgccgtaatc
ctggcggacgagatggggctgggcaagacggtgcagaccatcgccttcttagcgtccctc
cacgccgagtgctgcgagctgccgcacctggttgtcgtacctctatccaccatgaggaac
tgggagagggagtttgaaacctgggcacccaacctgaatgtggtgtctttggcgggaaat
gtggaggcgagacaggtaaggaaattgaagcggagaatgttccattccgtgtttttcgat
cgagcttccgccaaaaaggaccgcgtcaagttccacgtgctgctgaccagctatgagatg
ttggcgctggaggcggggcagctgagcaagggactgcagtacggcgtgcttgtcgtggac
gagggccaccgactgaagaataaggactcaaagctgttccagttgctgacacagttcgat
gtacgacacaaagttctcttgacgggcacgccgctccagaaccaccttggcgagctcttt
atgttgctccactttttggagccggacaagttcccaagtcgggcagctttcgagtcccgc
ttctccagcttgtcgcagaacgaggacgtgactcagctgcatgcgctgctgcagccgcac
atgcttcgccggctgaagaatgacgtcatgaagcagctgccccccaagatggagcagctg
gtgcgggtggagctgagcccccagcaaagggaaatctacaggtccctgttgcttcagcac
tcctccgtgcttgtgggtcaccgggcggctgtcgctgctgccggtggcgccaccaccgcc
ctgaagaacctgatgatggagctgcggaaggcgtgtaaccacccgttcctggtggcccac
caggcgggcagggggggcgcaggaaggggaggtagggggaggcatcctacggatctggat
tcgctcgtcactcacagcggcaaactgcagttggtggataagatggcgatgcggttgcga
gatgcgggacatcgactgatcatcttctcgcagttcactcgcacgttggacctgctggag
gagtggttggtgggccgcgggctggggtatatgaggatcgacggaacagtggcaggctct
gagcgtcagaagcgcatcgaccgcttcaaccagcatccggattcctacttttgtttcctg
ctctccacgcgggcggggggtctggggatcaacctggccaccgccgacaccgtcatcatc
tttgacagcgactggaacccgcataacgacctgcaggcccaggcccgagctcatcgtttg
gggcaggataagccggtcatgatttacaggctcgtcacccgacaaaccatcgaggagcga
atgatgcaggtcagccgcaagaagatgatgttggagcacctggtggttcgcaagatgagc
tcaggcggcgggggcgagctgaagcagtccgagctggacgacatactgagatacggggcg
caggagttgttcgcggatgagggggatgaggga
DBGET
integrated database retrieval system