KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_30242
Entry
VOLCADRAFT_30242  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K11643  chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    VOLCADRAFT_30242
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_30242
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    VOLCADRAFT_30242
  Chromatin remodeling factors
   NuRD complex
    VOLCADRAFT_30242
SSDB
Motif
Pfam: SNF2-rel_dom Chromo Helicase_C HDA2-3 ResIII PHD DEAD AAA_22
Other DBs
NCBI-GeneID: 9627732
NCBI-ProteinID: XP_002953010
JGI: 30242
UniProt: D8U2P2
LinkDB
Position
Unknown
AA seq 791 aa
EDAQKLLCCDGLQQLGCTAVYHMYCLDPPLTRLPAGDWYCPECAHKFRYQDIERVLDYRS
SLLHPPPPPPSTPTPHSTPISTPTPNPHPQPHPHISPGPTRREYHVKWKGESYLHCSWEP
EEGLAKMYRVRGVVCVCWGGGGEGEGGRGLRESREAEEREAEETGEYVHGVNPLWLEVDR
ILAEQKGRAQMEYLVKWKDLGYDQCTWELESDIAGYDAAIQRFRETKWRRGLAGDLDLPP
VKRRRRRLRAAWRMCKSRWGSGTRKWHSTPDFLHGGSLHPYQLEGLNWLYHKYCTGDAVI
LADEMGLGKTVQTIAFLASLHAECCELPHLVVVPLSTMRNWEREFETWAPNLNVVSLAGN
VEARQVRKLKRRMFHSVFFDRASAKKDRVKFHVLLTSYEMLALEAGQLSKGLQYGVLVVD
EGHRLKNKDSKLFQLLTQFDVRHKVLLTGTPLQNHLGELFMLLHFLEPDKFPSRAAFESR
FSSLSQNEDVTQLHALLQPHMLRRLKNDVMKQLPPKMEQLVRVELSPQQREIYRSLLLQH
SSVLVGHRAAVAAAGGATTALKNLMMELRKACNHPFLVAHQAGRGGAGRGGRGRHPTDLD
SLVTHSGKLQLVDKMAMRLRDAGHRLIIFSQFTRTLDLLEEWLVGRGLGYMRIDGTVAGS
ERQKRIDRFNQHPDSYFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDLQAQARAHRL
GQDKPVMIYRLVTRQTIEERMMQVSRKKMMLEHLVVRKMSSGGGGELKQSELDDILRYGA
QELFADEGDEG
NT seq 2373 nt   +upstreamnt  +downstreamnt
gaggacgcccagaagctgctgtgttgtgatggactgcaacagctgggctgtacggcagtg
taccacatgtactgcctggatccaccgttgactcggttgcctgctggtgactggtactgc
ccggagtgcgcccacaagttcagatatcaggacatcgagcgagttttggattacaggtca
tcccttctccatccaccaccaccaccaccatccaccccgaccccacactccacccccata
tccaccccaaccccaaatccacacccccaaccccacccccacatctccccaggtcccacg
cgtcgtgagtaccacgtgaagtggaagggtgagagctacctgcactgcagctgggagccc
gaggaggggctggccaagatgtacagggtgaggggggttgtgtgtgtgtgttgggggggg
ggaggggagggggaaggggggagggggcttcgtgaaagtcgggaggcggaggagcgggag
gcggaggagacgggtgagtacgtccatggcgtcaatccgttatggctggaagtagaccgg
atcctcgcggagcagaagggccgggcgcaaatggagtacctcgtgaaatggaaggacctg
gggtacgaccaatgcacgtgggagctagagtcggatattgcgggttacgacgccgccatt
cagcgtttccgggagaccaagtggcggcgggggctggcgggggatctggatctcccgccg
gtaaaacggcggcggcggcggctgagggcagcgtggaggatgtgcaagtccaggtggggc
tccggaacccgtaagtggcacagcacccccgacttccttcacggcggttccctccatccg
taccaactggagggcctcaactggctgtaccacaagtactgtacgggagatgccgtaatc
ctggcggacgagatggggctgggcaagacggtgcagaccatcgccttcttagcgtccctc
cacgccgagtgctgcgagctgccgcacctggttgtcgtacctctatccaccatgaggaac
tgggagagggagtttgaaacctgggcacccaacctgaatgtggtgtctttggcgggaaat
gtggaggcgagacaggtaaggaaattgaagcggagaatgttccattccgtgtttttcgat
cgagcttccgccaaaaaggaccgcgtcaagttccacgtgctgctgaccagctatgagatg
ttggcgctggaggcggggcagctgagcaagggactgcagtacggcgtgcttgtcgtggac
gagggccaccgactgaagaataaggactcaaagctgttccagttgctgacacagttcgat
gtacgacacaaagttctcttgacgggcacgccgctccagaaccaccttggcgagctcttt
atgttgctccactttttggagccggacaagttcccaagtcgggcagctttcgagtcccgc
ttctccagcttgtcgcagaacgaggacgtgactcagctgcatgcgctgctgcagccgcac
atgcttcgccggctgaagaatgacgtcatgaagcagctgccccccaagatggagcagctg
gtgcgggtggagctgagcccccagcaaagggaaatctacaggtccctgttgcttcagcac
tcctccgtgcttgtgggtcaccgggcggctgtcgctgctgccggtggcgccaccaccgcc
ctgaagaacctgatgatggagctgcggaaggcgtgtaaccacccgttcctggtggcccac
caggcgggcagggggggcgcaggaaggggaggtagggggaggcatcctacggatctggat
tcgctcgtcactcacagcggcaaactgcagttggtggataagatggcgatgcggttgcga
gatgcgggacatcgactgatcatcttctcgcagttcactcgcacgttggacctgctggag
gagtggttggtgggccgcgggctggggtatatgaggatcgacggaacagtggcaggctct
gagcgtcagaagcgcatcgaccgcttcaaccagcatccggattcctacttttgtttcctg
ctctccacgcgggcggggggtctggggatcaacctggccaccgccgacaccgtcatcatc
tttgacagcgactggaacccgcataacgacctgcaggcccaggcccgagctcatcgtttg
gggcaggataagccggtcatgatttacaggctcgtcacccgacaaaccatcgaggagcga
atgatgcaggtcagccgcaagaagatgatgttggagcacctggtggttcgcaagatgagc
tcaggcggcgggggcgagctgaagcagtccgagctggacgacatactgagatacggggcg
caggagttgttcgcggatgagggggatgaggga

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