Volvox carteri f. nagariensis: VOLCADRAFT_40166
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Entry
VOLCADRAFT_40166 CDS
T01330
Symbol
vmp11
Name
(RefSeq) metalloproteinase, extracellular matrix glycoprotein VMP11
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M11
Motif
Other DBs
NCBI-GeneID:
9623996
NCBI-ProteinID:
XP_002948376
JGI:
40166
UniProt:
D8TPK9
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
QRVLVMILDYTICGFPAGLDESTTRSLFLGPNGDGTGGIAQKYTQCSYGKFNLNTTAFRA
VTVPQTSCSTAITATCSWWAISNNCDLATKALIGNVAFSSFTHYIYIVPPGLPCPWSGLA
LLPGNQVWLQTSPYGVYRWATVMQEALHNYGLWHSWANGVEYADNSTAMGRGEACPNAAE
ISRMGWSSPATGGDAIDSTALPQAGTVRSFALPATYLTSTGNFLRVMPDWLPSYYTNPAI
AKNLYIAVRVAKGPDAGLLAPFASTVHVHEANATMDNGYPTLYATTDRKITIISTIPSLG
RANLTAYNLVVYGGSWASTDTMRVHLCRYTTSPSECPGLGAIEAPPPSPPPSPRPPPNPR
PSPPPRPPPPVKSPPPSPPPSPPSPPPPPPSPPPPPPSPPPPPPS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
caacgcgttcttgtcatgattctcgattacaccatttgcggattcccagcgggcctcgac
gagtctaccacacgctccctcttcctggggccaaacggtgatggcaccggcggcatcgcg
caaaagtacacgcaatgctcgtacggcaagtttaaccttaacaccacagcattccgtgcg
gttaccgtgccccaaacaagctgctccacagccatcacggccacgtgcagctggtgggcg
atttcgaataactgtgatttagcgaccaaagcgttgataggtaatgtggcgttttccagc
ttcacccactacatatacatcgtcccgcccggacttccatgcccctggtcggggctggca
ctgctccctgggaaccaggtttggttgcaaacctctccctacggcgtgtatcgctgggcc
actgtcatgcaggaggccctacacaactacggtctctggcactcctgggcaaacggtgtt
gaatacgcggacaactcaactgccatgggccgtggagaagcttgtcctaacgcggcagag
atttcccgcatgggctggtcctctcctgcgaccggcggtgatgccatcgactccactgcc
cttccacaggctgggaccgtgcgctcgttcgctctacccgccacctatcttaccagcaca
ggcaatttcttacgagtaatgcccgactggctgccatcctactacactaacccggccatt
gctaagaacctgtacattgccgtacgggtggcaaaggggcccgatgctgggctgctggcc
ccatttgcatcgaccgtccacgtgcacgaagccaacgccacgatggataatggatatcca
accctgtacgcgactacagaccgcaagatcaccatcatcagcacgattccctcgcttggc
cgtgccaacctcaccgcctacaatctggtggtgtacggcggatcttgggccagtacggac
accatgcgggtgcacctgtgccgctataccacgtccccttccgagtgcccaggactcgga
gctatcgaggctccaccccctagtcctcccccatctccacggcccccacccaatccgcgg
ccctcaccaccaccccggcccccacctccagtgaagtcgcctccacctagccctcctccg
tctccacctagccccccaccgcctccacctagccccccaccgcctccacctagcccccct
ccgcctccacctagc
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