Volvox carteri f. nagariensis: VOLCADRAFT_56439
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Entry
VOLCADRAFT_56439 CDS
T01330
Symbol
vmp36
Name
(RefSeq) metalloproteinase, extracellular matrix glycoprotein VMP36
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M11
Motif
Other DBs
NCBI-GeneID:
9618100
NCBI-ProteinID:
XP_002946936
JGI:
56439
UniProt:
D8TK06
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Position
Unknown
AA seq
620 aa
AA seq
DB search
MQCTQSHPPQDNDASRYPYTDRKISFINSAAPRSQVVLTDYKLVLYGGSWVGTDVLRVHF
CRYRDSPRECPSLDSLEAALPPPPRKNPLPSPKQSKAADARRPPPPGAAVGGVTAPKAVD
VTGELTLLITHQKEDQYIIIKSDGDSVPIALGYKPPTTDDSGQPVTRGALVTIVSTPPPR
ISGGRVCTCYMNVRLGTCEPVPGTKTIVLSAMPQLLFPDKGAIINQRLLVVITDYTSCGL
PPTMSVNEVRNIYLGPQGDGSGGIAQKYTQCSHGRFNLNTTAFTAIVINATCRNGAAIEC
DPFNVSAEANAKAKTLLGETAFSDFTQRTFLLPGALNCGFLGAAQLGNTERTVRESWLLN
VDKSVYRWGTVMQETLHNFGLRHSYKDGFEYTDNSTAMGLANACPNAAELAFMGWATPAE
GGGQLNSTELPVGTVRSFTLPATYMTSEGIYLRVTPDWLPSYRNLTIARNLYIAVRVNKN
GDAELKRPYANAVNVHEVYASEVGGEDGVVPVSDPFLNFLAAPVPGSLANLTNYNLVVYG
GSWVSLDTLRVHICRYRSTSQECPDPKSLSLPPSPRPPAPPLKPRPPTPSPRPPTPTPSP
KPPNPPQRSPPPSKSQNPRA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgcacccaatcacatcccccacaggacaatgacgcctcgaggtacccgtacacg
gatcgcaaaatcagcttcatcaattcggcggcaccccgcagccaagtcgttctgaccgat
tataaactggtcctgtacggcggatcttgggtcggtacggatgtcctcagagtgcacttc
tgccgctaccgtgattccccgcgggagtgtccctccctggactccttggaggccgccctg
ccaccgcctcccaggaagaaccccctaccgtcaccaaagcaatcgaaagcggcggatgcc
cgcaggccgcccccgcctggtgcagccgttggcggtgtcaccgcaccaaaagcagtggat
gtgacaggggagctcacattgttgattacccaccaaaaggaagaccagtacatcatcata
aagagcgacggcgacagtgtacccattgcgctgggctataaaccccccacgacggacgac
agtgggcagcctgtgacccgtggagcgcttgtgaccatcgtgagtactccaccgcctcgc
atctccgggggccgtgtatgtacatgctacatgaatgtacggctgggcacctgtgaaccg
gttccgggcacgaaaaccatcgtcttatcggcgatgccacagctcttatttcccgacaag
ggcgccatcatcaatcaacggctgctagtagtgattacggactatacgagctgcggctta
ccccctacaatgagcgtgaacgaagtgcggaatatctatttgggaccgcaaggggacggt
agcggcggtatcgcacaaaaatacacgcagtgctcacacggcaggttcaacctgaacacc
acagcgttcacggcgatcgttattaatgccacctgccgaaatggagcggctatagaatgc
gatccgttcaatgtttccgccgaggccaatgccaaagcgaagacgctgctgggtgagacg
gcgttttcagacttcacccaaaggaccttcttgctgccgggcgccttgaattgtggtttc
ctgggcgccgcgcagcttggaaacactgaacgcacggtacgggagtcctggctgttgaat
gtggacaaaagcgtgtaccgctgggggaccgtcatgcaagagacccttcataattttggt
ctgaggcactcatacaaggatggattcgagtataccgataattcaaccgctatggggcta
gcaaacgcctgccccaacgccgctgagttggccttcatgggctgggccacccccgcggaa
ggcggaggacaactcaattccaccgagctgccggtgggcactgtccgcagcttcactctg
cccgccacctacatgacgtcggaaggaatctaccttcgggttacccccgactggttgcca
tcgtacaggaacctcaccatagccaggaacctgtacatcgctgtacgagtcaacaaaaat
ggtgatgcagagctcaaaaggccatatgcgaacgcagtgaatgtccacgaggtctatgcg
tctgaggtgggtggggaggatggggtcgtcccagtgtcagatcctttccttaacttcctg
gccgcacctgtacctggcagtctagccaatttgaccaactataacctcgtcgtgtacggc
ggatcttgggtcagcctggacactctcagagtgcatatctgccgctacagatctacttct
caggaatgccccgacccgaagtctctatcgctgccaccgtcaccgaggccaccagcaccg
ccgctaaagccaaggccgccaacgccaagtccgaggccgccaacgccaacgccaagtccg
aagccgccaaacccccctcagcgttcaccaccgcccagcaaatctcagaacccacgagct
tga
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