Volvox carteri f. nagariensis: VOLCADRAFT_57174
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Entry
VOLCADRAFT_57174 CDS
T01330
Name
(RefSeq) hypothetical protein
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_3
PPR_1
PPR_long
TPR_7
TPR-S
Motif
Other DBs
NCBI-GeneID:
9620421
NCBI-ProteinID:
XP_002947318
JGI:
57174
UniProt:
D8TLP9
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MVSIAARPPLAAAGSGTGSLPARVTGHTRQNQSHNALNAPAVVARAPAQSSARSTTRTSA
APGAPVMTATERVRKSIDRSHERRSMEQRSHEQPQTEPLEQVAEDPLERLSADLTALSLQ
HAAAMAAAAAVSTAPPSSDANPAAASAAEPAISVTAPAAITSRGNRHQQINNSGSNRVTV
TVHTAAPPSAPASAVGSGSSAALSKRASATGLPAQLLALRDPACPVSLPPPGGLPASCLP
LDNWKLDKLVLALSANKATWRRSLLLFEWLKAAGHQLDDRLCTTLIRVCSDHGDAVSALA
VYDWMTGSTAAGGAGLEATAYTYTAAMRAALAGGLTDRAMSIWNEAWRRHTAGRLQMDCR
LCITYLELCTRLGLTDQALAMYGAMRAAPPGSRMAPTVHAYTAAMRAATEGGRWYRALDI
WADMRASGCEPTGHAFSAAISACAPAGDWSRAVALFDEMTGPAGIRPDVVSCTALITALA
SGGEADRAEAVVAWMLANGVRPNARTYTALMAALGNAKRWSRAVEVLGRMQTPEWGGVQP
NAYTYSALLKSLGEHGQWQLAEAVFSSIERQVLGPAAAAPPAAAALSLAAALASSPAASV
PTSAAGAAGAPQLISPLTALLAQAAVTASVEAAASSTSSSAVAVAAAGGGMYDNPASYAA
PQRTWTRPSQLHGLSLDLTSLAAGGTAAAAAEADAASSAEPSRRSFSLFSHPPAAASAAA
STAPSSPLSASSFCVTDDVPLRAGILQAISSTEVAHPWRSALDSASAGTLASQLTAAAAA
AAAAASDVSAFSNHVAIGHMAGAPGSGVPSAPVAAAAAAASFPLGFAANAVDMSAPSTAP
SPATMLAGPPAPSTAVNHHNHHHTHIPGSSHSSPHHHGLLNEVVCGALMLAYERAGKWQE
AVGVLLRAMNLGITPNTVMYNTAISAAGKAGQLEIAEKLYSKVRQPDTVTHETMIAAYGM
AGLPDRAEAVFSALTAAGLRPRDFAFCGLIAAHSLAGDWEGAMRVRTRMRRAGVQPSADV
YNALLAACERAGQPDKALELLGAMRRDGVEPNALTGQLLSLVGRQGVRSVEGQQVAAAAL
SAAVAAYGTLLMQTGLF
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctattgccgcgcggccaccgcttgccgcggccggcagcggcaccggcagcctt
ccagcccgtgttacagggcatactcgacaaaatcaaagccataatgccctcaacgcgcca
gctgttgtggctcgggcgcctgctcagtcaagcgcgcgctcgaccacgcgaacttcggcg
gctcccggagcccctgtcatgactgcaaccgagcgcgtacgcaagtcaattgatcgtagc
catgagcggcgttctatggagcagcgaagtcacgagcagcctcagacggagcctctggag
caggtcgccgaggatcccctagagcgcctctccgctgacttgacagccctctccctccaa
cacgctgcagctatggcagccgcggcagccgtcagcaccgcacctccctcttccgatgct
aatcctgccgctgcatccgctgccgaaccggcgatttccgtcacggctcccgctgccatc
acctctcgcggcaacaggcaccagcaaatcaacaacagtggcagtaaccgcgtcaccgtg
acggttcacactgccgcgcccccgtcggcgccggcctccgctgtcggcagcggcagcagc
gctgccctgagcaaaagggcctctgccacgggtctccctgcacagctgctggcgctccga
gaccccgcctgccccgtgtccctgccccccccggggggtctacccgcctcctgcttgccc
ctggacaactggaagctggacaagctggtgctggccctctccgccaacaaggccacgtgg
cggcgctcgttgctgctgttcgagtggctcaaggccgcaggccaccagctagatgaccgc
ctgtgcaccacgctcatccgcgtctgctccgaccacggcgacgccgtcagcgccctggcg
gtgtacgactggatgacgggctccaccgctgccggcggtgccgggctcgaagccaccgcg
tacacctacaccgccgccatgcgcgccgcgctggcgggtggcctgacggaccgcgccatg
tccatctggaacgaggcctggcgccgccataccgccggccgcctccaaatggactgccgc
ctgtgcatcacttatttagagctgtgcacacgtctgggccttacggaccaggcgctggcg
atgtacggcgccatgcgggcggcgccgccgggcagccgcatggccccgacggtgcacgcg
tacactgccgcgatgcgcgccgccaccgagggcggccggtggtaccgggccctagacatc
tgggcagatatgcgggcttcgggttgcgagccgactggtcatgccttctctgcggcgata
tcggcgtgtgctcccgccggggactggagtcgcgccgtcgcgctgtttgacgagatgaca
ggtcccgccggcatcaggcccgatgtcgtatcctgtacggcacttattacggcgttagcg
tcgggcggcgaagcggaccgcgccgaggcagttgtggcttggatgttggcaaacggtgta
cgaccgaatgcccggacgtacactgctctgatggcggcgttggggaatgcgaagcggtgg
tcgcgggcagtggaggtcctggggcggatgcagaccccggaatgggggggagtacaaccc
aacgcgtacacctactcggccctcctgaagagtctcggcgagcacggtcaatggcagctg
gcggaggccgtgtttagctccattgagcgccaggtgctgggccccgccgccgcggcgccg
ccagccgccgccgcgctctccctcgcagcggcactggcgtcctcgcccgcggcatccgta
cccacatcggctgcgggggccgcgggggcaccgcagctcatcagtccactgacggccctg
ctggcacaggctgccgtgacggcatccgtcgaggccgcggcatcctcaacatcatcttcc
gccgtagccgtagctgctgccggcggcggcatgtacgacaaccctgcctcgtacgctgct
cctcagagaacctggactcgtccgtcgcagctgcacggcctttccctggacctgacgtcg
ctagcggccggcggcaccgccgctgccgctgcagaggcagacgccgccagttcagcggag
ccgtcccgtcgcagctttagcttgttcagccacccgccggcggcggcgtcagcggcagca
tccacggcgccgtcctcacccctatccgcttctagcttctgtgtaactgatgatgtgcct
ttgagggctggtatccttcaggcgatttcctcgacggaggtggcccatccctggaggtct
gccttggacagcgcctccgccgggaccctcgccagccagctgacggcggccgccgccgcc
gccgccgccgccgcttccgacgtatctgcctttagcaatcacgtcgcaatagggcacatg
gccggagctccaggtagcggcgtgccgtcggcaccggtggcggcagccgcggcggcggct
tcgttccctctgggttttgctgctaacgccgtcgacatgtcggcgccgtcgacagcacct
tcacccgcgactatgctggcgggtccccctgccccgtcaactgccgttaaccaccacaac
caccatcacacccatatacccggttcctcccactcttcccctcaccatcacggcttgctg
aacgaagttgtttgcggcgccttgatgttggcgtacgagcgggctggcaagtggcaggag
gcggtgggggtgctgctgcgggccatgaacctgggtatcactcccaacaccgtgatgtac
aacaccgcgatttcagcggcgggcaaggcaggccagctggagattgccgagaagctctac
agcaaggtacgacagcccgacacggtcactcacgagacgatgattgcggcgtacggcatg
gcgggtcttccagatcgtgccgaggcggtgttctcggccctgacagccgccggcctgcgg
ccccgggacttcgccttctgcggcctcattgccgcccacagtctcgcgggggactgggag
ggcgccatgagggtccgtacgcgcatgcggcgcgcgggtgtgcagccgtcagctgatgtc
tacaacgcgctgttggccgcgtgcgagcgggctggtcagccggataaggccctggaactc
cttggcgcgatgcgacgggatggggtggagccaaacgcactgacaggtcagttgctgtcg
ctcgtaggccggcagggcgtgaggagtgtggagggccagcaagtggcggcggcggcgctg
tcggcggcggtggcggcgtacggcactttgttgatgcaaacgggtctgttttag
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