Volvox carteri f. nagariensis: VOLCADRAFT_60514
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Entry
VOLCADRAFT_60514 CDS
T01330
Symbol
vmp22
Name
(RefSeq) metalloproteinase, extracellular matrix glycoprotein VMP22
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M11
Motif
Other DBs
NCBI-GeneID:
9617816
NCBI-ProteinID:
XP_002950621
JGI:
60514
UniProt:
D8TVV3
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MHTFPATDLSAVCPLTFIPLGVSHAVVHGFGVLAPNGPADNYVRTQIAGELVYITLDNVD
QWLIRDSYGVLIPLMGGYKPPKTDSGGTPVTPGSAVQLDCLYKVSTGDCTPDNSTILTII
SVAPGPPSTLGTAIFQSLLVMIIDYTDCGLPATINETEIRTLYLGPNGDGNGGLADKYTQ
CSYGRFGLNITAFRVVRVRHQCSTPITTTCAAWAISALADTATKALIGTVAFSSFSHYTY
IVPPGLQPVCPWSGLAVLPGRQTFLQTSANGVYRWATVMQEAIHNYGLWHSWQNGTEYGD
YSTTMGRGDACPNAAEISRMGWATPAVGGDQLNSSALLPGTARTFTLPATYLTGNNNYVR
VTPDWLPVYNNTLTGRNLYIAVRVAKNVDAGLSNTIYASKVNIHEVNATMDNGYPTTFTN
SDRKIQFINTVDPMSQLAMGAYQLVVYGGSWVGTDTLRVHLCRFLASPSECPSLSTLEVQ
PPPPTPSPRPPSPSPPPFRPPVPSPPPSTRPPTVRPPPSPRPPPRTPPTPSIQLLMPPPP
PSPQPPVLPPPPSPQPPVPPPPPPPPPSPQPPVPPPPPSPQPPVPPPPPSPQPPVPPPPP
SPQPPVPPPPSTRPPMKPPPSPPTLRPPPRSPSPPSPKLSSPCSPPPRPPPPRPPPRSPP
PGPPPPRPPPPKPPPPRPSPSSLKPPSSPPPRSPSPSPPFMPLSPTVAPLFSTWPPPAEA
SKWVSRGDLNHVHNQ
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcataccttcccagctaccgacttatcagcagtctgcccgctaacctttataccgctc
ggggtgtcacacgcagttgtccatggctttggtgtgctagcaccaaatggacccgccgac
aattatgtaaggacgcagattgcgggagagctggtttacatcacgttggacaatgtggat
cagtggttgattcgcgacagctacggtgtgctgataccgctcatgggcggctacaaacca
cccaaaacggactcgggaggcacacctgtaactcctggatccgccgtacagttggactgc
ctctacaaagtgagcactggcgactgcacgcccgataactcgacaatccttaccatcatc
tccgttgcaccggggcccccctcaaccctcgggacagccatattccagagcctgctagtc
atgatcatcgattacactgactgtggcctgccagcaacgataaatgagaccgaaatccgg
accctctacctgggcccgaatggggatggcaatgggggccttgccgacaagtacacacag
tgctcctatggaaggttcgggctcaacataaccgcctttcgggtggtacgtgtgaggcat
caatgttcgacacctatcacgactacatgtgccgcctgggcaatctcggctctggcagac
actgccaccaaggccctcatcggcactgtagccttctcatccttcagccactacacctac
atagtgccaccgggccttcaaccagtgtgcccctggtcagggctggcagtattgccgggc
cgacagaccttcctgcagacatcagccaatggagtgtacagatgggcaacagtaatgcag
gaggccatacacaactatgggctatggcactcttggcaaaacggcacagagtatggcgac
tactccacaactatgggccgtggtgacgcttgccccaacgctgcggagatctcccgcatg
ggctgggccacacctgcggtcggaggtgaccagctgaacagcagtgccttgctgccaggc
acagctcggacctttacactgcctgccacctacctgactggcaacaacaactacgtgcgg
gtgactcccgattggctacctgtctacaacaatacattaacgggtcgaaacctttacatc
gccgtccgtgttgccaagaatgtcgatgctggcctaagcaacaccatatatgcatccaag
gtcaacatccacgaagtaaatgcaaccatggacaatggctaccccacgaccttcacaaac
agcgaccgcaaaatccagttcatcaacaccgtcgatcccatgtcgcagttggcaatgggc
gcctatcagttggtcgtgtatgggggctcctgggtcggtacggacaccctgagggtgcac
ctctgccgcttcttggcctcaccctcggagtgcccttccctaagcaccctggaagtccag
ccaccgccgcctaccccttcaccgcgtccccccagcccgtcaccacccccattccggccc
cctgtgccgtcgccacctccttcaacccgaccccccactgtgcgaccgcctccctcccca
aggccaccccccaggacgccacctactccttcaatccagctcctcatgccaccaccacct
ccctcaccccagccccccgtgttaccaccacctccctcaccccagccacctgtgccacca
ccaccaccaccaccacctccttccccccagccacctgtgccaccaccacctccttccccc
cagccacctgtgccaccaccacctccttccccccagccacctgtgccaccaccacctccc
tcaccccagccccccgtgccaccaccaccctcaaccaggccacccatgaaaccaccgcct
agtccgcctacactgaggccaccaccgcgtagcccatccccaccctcgccaaaactgtca
tctccttgctcgccacctccgcgtccaccaccaccaaggccgccaccccgtagcccaccg
ccaggcccaccaccacctaggccgccaccacctaagccgccgcctcctaggccatctccc
tctagcttgaagccacctagttctcccccaccacgcagtccatcaccctcaccaccattc
atgcctttatctcccaccgtggcaccgctgttttccacctggcctccaccggcggaagcg
agtaagtgggtttctcgtggggacctcaaccatgtacataaccagtga
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