Volvox carteri f. nagariensis: VOLCADRAFT_60687
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Entry
VOLCADRAFT_60687 CDS
T01330
Symbol
vmp23
Name
(RefSeq) metalloproteinase, extracellular matrix glycoprotein VMP23
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M11
Motif
Other DBs
NCBI-GeneID:
9617818
NCBI-ProteinID:
XP_002950623
JGI:
60687
UniProt:
D8TVV5
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
QRLLVMVLDYPACGFPATTTVEEIRTLYLGPNGDGKGGLAEKYTQCSYGRFNLNITAFRA
VRVTHLCSTPITTTCASWAISALADAATKPLIGPAAFSSFSHYTYILPPGLQPVCPWSGL
AILPGRQTFLQTSANGVYRWATIMQEALHNYGLWHSWQNGIEYGDYSTAMGRGDACPNAA
EISRMGWATPAVGGDQLNSSVLPPGTARTFTLPATYLTGNNNYLRVTPDWLSMYNDSKSA
LNLYMAVRVAREGDAGLGQSYASKVNIHEVNATMDNDYPAPRFVNSDRKIQFINAVSPMS
QLNLDVYNLVVYGGSWVDTDTLRVHLCRFKNSPFECPSLSDLEAQPPPPLSPRPPSPRPP
RPPLPRPPPPPPRPPPPTTPPPRQLPPSPQPPCSPPPPPPRPPPPRPPPPSPPPLRPPPP
SPARIGKFAFLALLVGSCELRTRFWPPADHYLSRLDTLISCKYRKVRCAG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
cagcgcctcctggtcatggttctcgactacccggcttgcggcttccctgctaccaccaca
gtggaagaaatccggaccctctacctgggcccaaatggggatggcaaggggggccttgct
gaaaagtacacacagtgctcctatgggaggttcaacctcaacataactgccttccgggct
gtgcgtgtgacacacctgtgttcgacacctatcacgactacctgtgccagctgggcaatc
tcggctctggcggatgcagccaccaagcccctcatcggccctgcagccttctcatccttc
agccactacacctacatactgccaccggggcttcaaccagtgtgcccctggtcagggctg
gcaatattgccgggccgacagaccttcctgcagacatcagccaatggagtgtacagatgg
gcaacaataatgcaggaggccctacacaactatggtctctggcactcttggcagaacggt
attgagtacggcgactactcgacagccatgggccgcggtgatgcctgccccaacgctgcg
gagatctcccgcatgggctgggccacacctgcggtcggaggtgaccagctgaacagcagt
gtcttgcctccaggcacagctcggacctttacactgcctgccacctacctgactggcaac
aacaactacctgcgggtgactccggattggctgagtatgtacaacgactcaaagtcagct
ctgaacctgtacatggctgtccgagtagccagggaaggcgatgctggcctaggacaatca
tacgcttccaaggttaacattcatgaagtaaatgccacgatggataatgactaccccgct
cctcgctttgtaaacagcgaccgcaaaatccagttcatcaacgccgtcagccccatgtcc
cagctgaacctggatgtctacaacctagtcgtgtatggaggatcatgggtcgatacggac
accttgagggtgcacctctgccgatttaagaactcgccttttgagtgcccttccctcagc
gacctggaagcccagccacctccacccctttccccgcggcccccgagcccgcgacctcct
agacctccactgccaaggccaccacctccaccgccaaggccgccgccacctacgaccccg
ccaccaagacagctgcctcccagcccgcagccgccttgctcaccacccccaccacccccc
aggcccccaccccccaggcccccaccccccagcccgccaccactgaggccaccgccccca
tctcctgcacgaataggtaagtttgccttccttgctttgcttgttggctcatgcgagctc
cgcactcgtttctggccaccagcagaccattatctatccaggcttgatactctgatttcg
tgtaagtataggaaggttaggtgtgcagggtaa
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