Volvox carteri f. nagariensis: VOLCADRAFT_61971
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Entry
VOLCADRAFT_61971 CDS
T01330
Symbol
vmp6
Name
(RefSeq) metalloproteinase, extracellular matrix glycoprotein VMP6
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M11
Motif
Other DBs
NCBI-GeneID:
9628367
NCBI-ProteinID:
XP_002952117
JGI:
61971
UniProt:
D8U0A3
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MNGYPSRICLSKCAVLYDSKYRTPSCLIHATATTRHATGLCQEGAEATEFGSFTFGGEPP
EAVSGPEDASSVASTSTAALDVSGELVFIDTQQQYSAQWAIRTGNGLLTPIALGYEPPKT
DELGQALAPGALVTISCSMDPLGTCNPGPGSQTAVLSAESAFLADTRETHQRMLVIILDY
SACGAPAAVNGTAVRSIFLGPNGDGSGGVAEKYRQCSHGKLTMNTTAFTVITVKAACSDG
VVQSCSYTFASITADAMAKGVLGQKAFSEFTRIVYVIPPRVPCAFSGIALLPGNRVWLTS
GRIGGVYNWTSIMQEVLHGYGLQHAWQNGMEYDDYSTFMGRGDVCLTAPELAYLGWATPA
PGGDRIDSSRLRVRTTLSFSLPATYLSPDGNYLRVVPDWLPSYSEPTVGKNLYIAVRVNK
GGDALLGTFYANKVNIHELNASLDNNPLAQPYTNRQTTCVTAIQPRSQTNLTAYNLVVYS
GFWVGGKDILRVHLCRYDSTPDECPSLKSLEPPLPPAPPRPPPPPPKPPSPTPRLPSSPR
LPPSPRLPSSPRPQASPRPQPSKTSLKSPPPPRK
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaatggctatccttcaaggatatgtttatcgaagtgtgccgtactgtacgacagcaaa
tacaggacgccatcttgtctcatccatgctactgctacaacccgccatgccacaggacta
tgccaggagggcgccgaggccactgagttcggtagctttacgtttggaggagagcctcct
gaagcggtctccggccctgaagacgcctcctctgtcgcgagcacaagcactgcagcattg
gatgtgtcgggcgagctcgtgttcatagacacccaacagcaatattcagctcaatgggcc
atccgcacgggcaacggtttgctgacacctatcgcactcggatacgagccccccaagaca
gatgaacttggacaggccctggcgcccggagcactggtgactatttcctgcagcatggac
cccctaggaacctgcaaccccgggccaggctcccagacagccgtcttgtcggccgaatct
gcctttttggcggacactcgagagacacaccagcggatgctcgtcataattctagactac
tccgcctgcggtgcacccgccgctgttaacggaacagctgtgcgctcaatcttcctagga
cccaatggtgatggcagtggcggtgttgcggagaaatacaggcagtgctcacatggcaag
ctcaccatgaacaccacagcgttcaccgtgataacagtgaaggctgcctgttcggatggg
gtggtgcagtcatgcagctatacatttgcttccattacagctgacgccatggcgaagggg
gttttaggtcagaaggcattttcagagtttacccgcattgtatacgtgatccctccccga
gtaccttgcgcgttttcgggtatagcgcttttacccgggaacagggtttggctaacgtcc
ggacgcattggcggtgtgtacaactggacctcaattatgcaagaagtactccatggctac
gggcttcaacacgcatggcagaatggcatggagtacgatgattattccaccttcatgggc
cgaggagatgtctgcctgactgctcctgagttggcctacctgggctgggccacacccgcg
ccaggaggtgaccgcatcgattcctcacgactgcgagtacgaaccaccctcagcttcagc
ctgcccgccacctacctatcccccgatggcaactacctccgggtcgtccccgactggctg
ccgtcgtacagcgagcccaccgtaggcaagaacctgtacatcgccgtacgagtcaacaag
ggcggggatgctttactgggaacgttctacgcaaacaaagtgaatattcatgaactcaac
gcctctctggacaataatccattggcgcagccatacacgaaccgtcaaactacatgcgtc
accgccattcaacctcgtagccaaacaaatttgaccgcctacaatctcgtggtatacagc
ggtttttgggtcggtggcaaggacatcctcagagttcacctgtgccgatacgattccact
cctgacgagtgcccctccctgaagtctctggagccgccgctccctccagcaccccctagg
ccgccaccaccacccccgaaacccccaagcccaaccccgcgactgccgtccagcccccgg
ctgccgcccagcccccggctgccgtccagccctcggccgcaggccagccctcggccgcag
cccagcaagaccagcctcaagtctcctccaccaccgcgcaaataa
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