Volvox carteri f. nagariensis: VOLCADRAFT_72688
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Entry
VOLCADRAFT_72688 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K14007
protein transport protein SEC24
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
VOLCADRAFT_72688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcn04131
]
VOLCADRAFT_72688
Membrane trafficking [BR:
vcn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
VOLCADRAFT_72688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
9624507
NCBI-ProteinID:
XP_002946540
JGI:
72688
UniProt:
D8TJ33
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MQPHGSVAGAFPPPPGPPGGMPPPPPGPAGRPGMPPPPPPPGVPGMPAPVPGMPGMPPPP
PPGIPGKAPPGPPGMPGMPPPPPGMPGMPPPPPGGFHTAGAPPPLSGGPGRHGMQPPPMG
GYDPYAAQVRCVGIGLGLCAGQRLAEQFESLTVGPAGPGAMAPDGVDPGALARPVGEQLA
RALAPQPPADPGNCSPDNMRMTINAIPVSTALKTRMALPLGVIVHPMADEFHGRTVPVVQ
LSSAGIVRCRRCRTYMNPFIQWTDAGRRFKCNVCSMLNEIPVEYFSSLDHNGRRRDADER
PELSQGTVEYVAPADYMVRAPMPPVYFFLIDVSYSAVASGMVATVAAAIKSCLDSLPGDE
RTLVGFLTFDSSLHFYNIKASLSQPQMLVVTELDDPFVPLPDDLLVNLRESRAVVDALLD
ALPNNFTGTAQVECSMGPALQAAFMVTSHIGGKLLLFQSSVPSLGVGKVKNRDNPSAYGT
EREPALRNPDDPFFKRYAAECSRVQITVDVFVMSMQYCDLASIAAIPRYTCGELYHYPGF
MAQRDGTKLTAEICHNLTRPTAWEAVMRVRCSKGLRISAFHGHFFNRSTDLLALPTCDPD
KAFAVEIAHEEGVVQPGMAYVQCALLYTNSNGERRIRVHTMAVPVVSELSDLYNNTDAGA
MSCMLAKLSVEKYLSSRLDETRQSLHLRLSGALKEFRLMNASAAMRTPNKFIFPETYKYL
PIWTLGLMKCAAFRGGAKDVNSDERIAVGHFLMAGGVDAVARLVYPAAFALHDPNGPWGI
EQPDGSVPLPPTVPLTMAALVDGGAYLLDTGRLFVLWVGRAISPQWCVEVFGTDPMSLPQ
DTSAVLVEPGRDAPMSRRVNAVLRTLRAKRLLHQQVFVVRQGSGLDAHVLPYFVEDRSPS
TQSYTEYMVALHKAVMAK
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccccatgggtccgtagccggggcctttccgcctccaccgggaccgccaggcggc
atgccgccgccgccgccgggtcctgccgggaggccaggcatgcccccgccgccgccgcca
cctggggtacctggcatgccggccccggtccccggcatgccagggatgccgcctccgccc
ccaccaggaatacccggtaaggcaccgccaggaccgccggggatgcccggcatgccgccg
cccccaccagggatgccaggaatgccgccgccgccgcccggcggctttcacacagccgga
gcaccgccgccactttctggtggcccgggccggcacggtatgcagccgccgccgatgggc
ggatacgacccctacgcagcgcaggtgcgttgcgtcgggataggattgggcctctgtgca
gggcagcgactggcggagcagtttgagtccctgacggtgggtcctgccggccctggggcg
atggcgccggacggagtggaccccggcgccttggcgcggcccgtcggggagcagcttgcg
cgggcgctcgctccgcagcccccagcggaccctggcaactgcagcccggacaacatgcgc
atgaccatcaatgccatacccgtcagcacggccctgaagaccaggatggcgcttcccctg
ggtgtcattgtgcaccccatggcggatgagtttcatggccgcactgtgccggtggtgcag
ctcagtagcgcgggcatcgtgcgatgccgccgttgccgcacctacatgaacccattcatt
cagtggacggatgcaggacgcaggttcaagtgcaacgtgtgcagcatgctgaacgagatt
ccggtggagtacttcagcagcttggaccacaacggccgtcgtcgggacgcggacgagcgc
ccggagctgtcccagggtaccgtggagtacgtagcgccggcggactacatggtccgggcg
cccatgccgccggtttatttcttcctcatcgacgtctcttacagcgccgtggcttcgggc
atggtggctactgtcgctgccgccatcaagtcttgcttggactccctgcccggggatgaa
cgcacgctggtgggcttcctcaccttcgacagctcgctccacttctacaacatcaaggcc
agtctgagccagccccagatgctggtcgttacggagctggacgatcccttcgtgccgctg
cctgacgacctgctggtcaacttgcgggagagccgtgcagtggtggacgcgctgttggat
gcgctgcccaacaacttcactggcacggcgcaggtggagtgcagcatggggcccgcactg
caggctgccttcatggtaaccagccacatcggcggcaagctgctgctctttcagtcgtcc
gtgccgtcgctgggtgtgggcaaggtcaagaaccgggataaccccagcgcctacggcacg
gaacgcgagccggcgttgcgcaatccggacgaccccttcttcaagcgctacgccgcggag
tgctcgcgggtgcagatcacggtggacgtgtttgtcatgtccatgcagtactgcgacttg
gccagcatcgctgccatcccgcgatacacatgtggagagctgtaccactaccccggcttt
atggcgcagcgtgacggtaccaagctgaccgctgagatctgccacaacctgactcgcccg
actgcctgggaggctgtcatgcgcgtgcgctgctccaaggggttgcggatatccgccttc
cacggccacttcttcaaccgctccaccgacctgctggcgctgcccacgtgcgatccagac
aaggctttcgccgtggagatcgcgcatgaggagggcgtggtgcagcccggcatggcgtat
gtccaatgcgccctgctctacacgaactccaatggcgagcgccggatcagggtacacacg
atggcagtgcctgtggtttcggagctgtccgatctgtacaacaacaccgacgcgggtgcc
atgtcgtgcatgttggccaagctatcagtggagaagtacctatcctcgcggctcgatgag
acgcggcagtcgctgcacttgcggctgagcggcgctctcaaggagttccggctcatgaac
gcgagtgctgcaatgcggacgcccaacaagttcatcttcccggagacctacaagtacctg
ccaatctggacgctgggcctgatgaagtgcgcggcgttcaggggtggcgccaaggacgtt
aactcggacgaacgcattgccgtgggccacttcctcatggctggtggcgtggacgccgtc
gcgcggctggtgtaccccgcggcgtttgcgctgcacgatcctaacgggccctggggcatc
gagcagccggacggctccgtgcccttgccgcccacggtgccactcaccatggcggcgctt
gttgacgggggtgcttacttgctggacacgggccgcctgtttgtgttgtgggtgggccgg
gcaatctcgccgcagtggtgcgttgaggtgttcgggaccgatcccatgtcgctgccgcag
gacacgagtgccgtgttggtggagccggggcgcgacgcccccatgtctagacgcgtgaac
gctgtactccgcacgctgcgcgccaagcggctactgcaccaacaggtcttcgtggtgcgc
caaggttcagggttggatgcacacgtgttgccgtacttcgtggaggaccgcagcccgtcg
acgcagtcatacaccgagtacatggtggctctccacaaggctgtcatggctaaataa
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