Volvox carteri f. nagariensis: VOLCADRAFT_82108
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Entry
VOLCADRAFT_82108 CDS
T01330
Symbol
vmp39
Name
(RefSeq) metalloproteinase, extracellular matrix glycoprotein VMP39
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M11
Motif
Other DBs
NCBI-GeneID:
9622215
NCBI-ProteinID:
XP_002953132
JGI:
82108
UniProt:
D8U3D2
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MIDTGGNGQQVFSGQLVAVNLHEFGGVQYALRGDDGNLVGITKDIKLPVRDVANKAISVG
AQVAFVSRVQPPETPQTLSRPVPQRCSVSSSTGFCASIERANTQVLQDANVVPLPSTGIV
QRRLVIILDYSACGYPATLTEDTARTIFLGDDWDGNGGIAQKFAQCSYGKLTFDAARFTV
IKVAAPCSSVVSTCSWYDIANGADAAAKNFTGLPGYNFYSFTHTTYVLPPAMQGVCSWSG
LALLPGTQTWLQTTSYGVYRWATAMQEILHNYGLWHSWQGGFEYEDYSTAMGRGSACPNA
AEASRMGWITSIPNAGALNSGSLPIATGRTFILPATYLTSEGVFIRIQPDWVTNYGATGK
NLYMAVRVPKGADTTINLNYANRLNIHEVNATMDNVAPAAPYTYTDRKVQYINNVRSMST
VTLTAYNLLVYGGAWVRPDTLRVHICRFRTAATECPSLANMEPEMPDPPLQPLPPPPAGP
DAPPPPPPPSPDPSPPPSPRPPMPRSPSPPPPSPYPPSPPPPRPPPP
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgatagataccggcggcaatggacagcaagtgttctctgggcagctggtggctgtgaac
cttcacgagttcgggggagtgcagtacgcactccgcggcgatgatggaaacttggtgggc
atcacgaaagacattaaactgccagtacgcgatgtggcaaacaaggccatttcagttggt
gcccaggtcgcctttgtaagtcgggttcaacctcctgaaaccccccaaaccctatcccgt
cccgtcccgcagaggtgctctgtgagctcgtctaccggcttctgcgcgagcattgagcga
gccaacacgcaggttcttcaagatgcgaatgtcgtaccgttgcccagcactggcatcgtc
cagaggcggttagtcatcatcctcgactattccgcttgtggctatccggccactctgacg
gaagataccgcgaggacgatcttcctgggtgatgattgggacggcaacggcggaatcgcc
caaaagttcgcacagtgctcgtacggcaagctcacgtttgatgcggcgaggttcacggtg
attaaagttgcggcgccgtgctctagcgtcgtgtccacgtgcagctggtatgatatagcc
aacggcgccgatgctgccgctaagaattttacgggcttgccgggctacaatttctacagc
ttcacgcacaccacatacgttctgccacctgccatgcaaggtgtttgcagttggtcgggt
ctagcgctgctgcccggcacgcaaacgtggttgcaaactacatcctacggtgtttaccgc
tgggcaacggccatgcaagagatcctgcacaactacggcttgtggcactcatggcaaggt
ggtttcgagtacgaggactactccactgcgatgggccgcggcagcgcatgtcccaacgcc
gccgaggcatcccgcatgggctggatcacttccatccccaacgctggagctctcaactca
ggctctctgcccatcgctaccgggcggactttcatactacccgccacctacctcaccagc
gagggcgtatttattcggatccagccagactgggtgacaaactacggtgccaccggcaaa
aacctttacatggcggtgcgcgtgccgaagggcgcggacacgacgatcaaccttaattac
gccaaccggctcaacattcacgaagtcaacgcgacgatggacaacgtagctcccgcagct
ccatacacctacacggatcgcaaggtgcagtacattaacaatgtacgtagcatgtctacg
gtgacgctgacggcctacaatctcctggtgtacggcggtgcttgggtccgtcccgataca
ttgcgtgtgcacatctgtcgcttccgtactgccgctacggagtgtccttcgttggcgaac
atggaaccggagatgccagacccgccgcttcagccacttccgccaccaccagctggccca
gacgcgccgccgccgccgccgccgccaagcccggacccgtcgccgcctcccagccccaga
ccacccatgccccgatcacccagcccaccgccgcccagcccttacccgcccagcccgccg
ccaccaaggcccccaccccct
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