Volvox carteri f. nagariensis: VOLCADRAFT_86673
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Entry
VOLCADRAFT_86673 CDS
T01330
Name
(RefSeq) hypothetical protein
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_8
Motif
Other DBs
NCBI-GeneID:
9617726
NCBI-ProteinID:
XP_002946580
JGI:
86673
UniProt:
D8TJA6
LinkDB
All DBs
Position
Unknown
AA seq
1932 aa
AA seq
DB search
MAQSDNRRDLQHASKLGRDGSGKSGQTLAHYVSASHSASGMVTSTENGIGNNLLPAPPPL
TDMLSFRLQPPMQGTGPQQPPQTSTHPEQLISSLRQSTAWATPVGGSPPRAIPRLASSRE
STALLEEARKKAQEAMEVLSGGQATAALQELEAVLGPREMNLTALVTATRNLRGDLCKEL
HNTEKQASFARAQIKALERQHDLLRHQLRLRPEPILLPPPPAVAGLSDTGTPSMSPKNQN
YNFDALMVPRSGNGSMSAPQSPMAHGKPRLDGSSPLPLRPGYFNAMAATASAVGGDPAAE
GGAIGGGGILGAVSGSRDGSSRDGATAAAAAAAMFNGDAPAGFAGAVAAAAAAAAAAASP
TAQLSSLSFNERSGLEYPGGGTSLLSGKWSLAGAMERTLRMRALNRMEAALAALAAEQAA
HERPPSRGIVEAAPPVDVEELRRLKHTPQGIAENLVLHPRPIAAMQPDTPSYLGVNVRRT
PSPGPGPLLGPADGLSGAPRRLGAIGGGSFAFTPGSTSPDLGASLQWNNRGISTAKMHLL
KEALAQSPQLVRLCLAGNKMSNEDVTELMSLLSDPAGPRIQEIILDQNTNLSWRCALPLA
LALGMSPDMAATSTAADWAAVAAAMPSSATPASIVAPPAVPSARDKIHRLDIRVLSLCGV
KLGDKGVSQLAEGLRANNSLRELDLRRCGISDAGGAVLMDVLESNGQLQRLDVSWNALRT
ESARVLEVALAGNAGLRELSLAHNGFNDLDGARVIKGLLNHGRWLQVDLSHNTLGPGSCM
MAGELLRRLGAAAASIMVQGNYAEGWPRLPTIGGPGGSSSPHSHSAGWPQQQQQLLMQTS
RTDPLVDTHSVGRNAVPVPDPSKRPYGMADDRSAPPSPTTLRLSAGQLGSQLLKGQPSLA
LDGNPLGSTGLRIILDAMEAMSQSLMSAAGLGPPDPSDLEDFAGAEVPPLPLQITIANCN
VAPPSERMIGGDDEANPFLPSIAVLCRPPGGSGGGRAGQAAKDAAAKKAAAAKASSAKGK
TRIENRNGEYGDREMCRPKRNGGSREARSPTSSSPTPGAAHAALTLQSPHLDLQSPAGVY
SLDLAHPATAVLVAYLLRMRERLNAAAEVGLVATGVTVSIGSISVNGKSIKLDQLSAVDS
WTEGTLQLTVKAPAVLALEAPLPLTPRVAEWLASLVGNLTASPLWKLSVIQAAGSVCFFT
PGQCLALLAGFDRDTQATESVAAAQMLYARSAQPLAFWEHVLPRLPSAQQASLRERVGDL
VALDMTRPMGRYTLNLSRQVDRFVALRLQLASALENSWVENKYYVNWLNASFNGQPLDRP
GLTHIRDYTLPGAGVLRLDYVSYTKPGLGMAPAPPEELAELLSRLRNCNMTHIASLLQVR
AQVTPPPPPPPSRREHLRSPIGRRKQALPPPPPKPRLNAFQLMHSSLLDVARFLASPGPP
PPPPPPNPDGTAPPLPQLPTSWTATCGFDTEALFRRASVVPPEWSTAGYAMPLPPIGGEC
GPPGSGTGAATTGTGLGTGTDAPVLRAPSLATKSMKSIVGGRAPVLSVQMRASRRRSAKG
KEDEEEEWPVTQADYHAALLAMVHQAKDLPLLASKMGATHLGAAVSALLRYEGGERATAA
LLTALPPLAASKFLYDQVDPSPCLLPPDVRRQLLAAMPQDKVKLMEMAARGASDAAIARV
RQVRTALHLWASRRLVSCEQVEAVLGALHTEGDRVAAMVVLWPRMVDGRWKKAYLALKQS
EQRQVMVRLGFWHVYTCLGDPHGIFFSLDLGEPEQRDIARELVRMAVKETMRSKQEARAR
GGFYAATLLDLHGNGNPVSIPEDEKLWGMADSNFKTMDFLYCPTFEQSLERVSSSARQIQ
RYWSGLQARRQALLARAMASESATTFCYRTLLPIRTRPVQNLVRDCLRSLLGCHREELKK
AGRPFYAGACAT
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagacaacaggcgagaccttcaacatgcgagcaaattgggccgcgacggg
agcgggaagagcggccaaacactggcacactacgtgtccgcctcacacagcgcatcggga
atggtcacttctaccgagaacgggattggaaataacctgctgccggcgcctccgccgctc
acagacatgctcagcttccggctgcagccaccaatgcaggggacaggaccgcagcagcca
ccacaaacgtcgacgcatccggagcagctaattagtagtctccggcagtccacagcttgg
gctacacctgtggggggcagccctcccagggcgatcccgcggctggcgtcatcgagggag
agcactgcgttgctggaggaggcccgcaagaaggcacaggaggctatggaggtgctgtcc
gggggccaggccacagccgccctccaggagcttgaggcggtgctgggaccccgggagatg
aacttgacggcgctggtgacagccacccggaaccttaggggggacctctgcaaggagctc
cacaacacggagaagcaggcgagtttcgcacgtgcccaaataaaggcactggagcggcag
cacgacctgttgcggcaccagctgcgtctccgacccgagcctatcctgctgccgccgccg
ccggccgtggccgggctctcggacacggggaccccatccatgagccccaagaaccaaaac
tacaattttgatgcgttgatggtgccacgcagcggcaacggcagcatgtccgcgccgcag
tcacccatggcacacggcaagccgcgcttggacggctcgtcaccgctaccgctgcgccct
ggttacttcaatgcaatggcggccaccgcctcggctgtcggcggcgatcccgccgccgaa
ggcggtgcgattgggggtggcggtatcctcggcgctgttagcggcagccgcgatggcagc
agccgcgacggcgccaccgctgcggccgcagccgcagctatgtttaatggcgatgcgccc
gcaggctttgcaggcgccgtcgcggctgctgctgctgcggctgcggcagcagcctctccc
acagcccagctgagttccctgtcattcaacgaacgcagtggcttagaatatcctgggggc
ggcacgtcattgctcagtggcaagtggagcttggcgggggccatggagcggaccttgcgc
atgcgcgcactgaaccggatggaggcagcgctagcagcactggctgcggaacaggcggcg
catgagcgacctccgagccgcggcatcgtggaggcggcgccaccggttgacgtggaggag
ctgcggcggctgaagcacacgccgcagggcatagcggagaacctggttctgcaccctcgc
cccatcgccgccatgcagcctgataccccgtcgtaccttggcgtaaacgtccgccgtact
ccttctccgggaccggggcctctgctcggccccgccgacggcctatctggggccccacgg
cgactgggcgccatcggcggcggcagcttcgccttcacaccaggcagcacctcccccgac
ctaggtgcttccttgcagtggaacaatcgcggcatatccaccgccaagatgcacttgctg
aaggaagcactggcgcagtccccacaacttgtgcgcctgtgcctggcgggaaacaagatg
tccaatgaggacgtgacggagctgatgtccctcctgtcggaccccgccgggccccgcatc
caagaaattatcctagaccagaacaccaacctcagctggcgctgcgcgctgcccctagca
ctcgcgttgggcatgtcccccgatatggccgccacctccaccgccgccgactgggccgcc
gtcgctgcagccatgccgtcctccgcaacgcccgcctccatcgttgcaccgcctgccgta
ccctccgcccgcgacaagatccaccgcttagacatccgcgtcctcagcctctgcggcgtc
aagctgggtgataaaggcgtttctcagttagccgagggattgagggctaataactccctg
agggagctggacctgcgccgctgcggcatcagcgacgccggcggcgcggtgctgatggac
gtgttggagtccaatgggcagttacagagactggatgttagctggaatgcgctgcggacg
gagagcgcccgggtgctggaggtagcgttggcgggcaatgctgggctgcgggagctgagc
ttggcacataacggctttaatgacctggacggcgcgagggtgatcaaggggttgctcaac
cacggtcggtggttgcaagtagacctctcccacaacactctgggcccgggtagctgcatg
atggcaggggagctgctgcggcgactgggagccgcagcagccagcatcatggtgcagggc
aactatgcggagggttggcccagactgcccaccattgggggtccaggaggcagctccagc
ccccactcccactccgcggggtggccccagcagcagcagcagctgctcatgcagaccagt
cgcaccgaccctctggtagacacgcacagtgtggggcggaacgctgtgccggtaccggac
ccctcgaagcggccgtatgggatggcggatgatcgctccgctccccccagccccaccacc
ctgcgcctctccgcagggcagttgggctcccagctgctcaagggacagccctccctggcg
ctggacgggaacccgctggggagcactgggttgcgtatcatccttgatgccatggaggcc
atgagtcagtccctgatgtccgcagcgggattaggaccgcctgacccctccgacctggag
gacttcgcaggcgcagaggtgccgcctctacccctgcagatcaccatagcaaattgcaat
gttgcgccaccctcggaaaggatgattggtggggacgacgaggccaaccccttcctgccc
agtattgcggtgctgtgccgacccccgggcggcagcggtggcggcagagcggggcaggca
gccaaggatgcagccgccaagaaggcagcagcggccaaggcctcgtccgcgaaaggcaag
accaggatagagaaccgcaacggggagtatggggatagggagatgtgcaggccaaagagg
aacggcggctcccgcgaagcccgctcacccaccagctcaagccccacccctggggcggcc
catgccgccctgaccctgcaatcgccccacttggacctccagagccccgcgggtgtgtat
tccctggacctcgcccaccccgccactgccgtgctggtggcctacctgctgcgaatgagg
gagcggctcaacgctgcggcggaggtggggctggtggcgacgggggtaacggtgtccatt
ggcagcatatcagtgaacggcaagtcaatcaaactggatcagctgtcggcggtggacagc
tggacagagggcacgttacagctgacggtcaaggcccccgccgtgttggccctagaggcg
cccctacccctgacgcccagggtggcggagtggctggcatccctggtggggaacctcaca
gcctcgcccttgtggaagctgtccgtcatacaggcagccggtagcgtctgcttcttcacc
cccgggcagtgcctagcgctgctggcgggttttgaccgggatacccaggcgaccgagagc
gtggcggcggcgcagatgctgtacgcgcgctccgcccagccactggcgttttgggagcac
gtgctgccgaggctgccgtcggctcagcaggcgtcactgagggagagggtgggtgatctg
gtagccttggatatgactcgacccatgggtcgctacacactcaacctcagccgccaggtg
gaccgcttcgtagcgctcaggctgcagctggcgtctgcactggaaaacagctgggttgag
aacaagtactacgtcaactggctcaacgcatccttcaacggccaaccgctggaccgaccc
ggtctaacccacatccgcgactacacgctacccggcgcgggagtgttgcggctggactat
gtgtcgtacacgaagcccggcttggggatggctccggctcctcccgaggagctggcggag
ctgctgtcccgactgaggaactgcaacatgacgcacatcgcatcactgctgcaggttcgg
gcgcaggtgactcccccaccccctccaccaccatcccggagggagcacctcagatccccc
atcgggcgccgcaagcaagcactgcctccgccgccgcccaagccccgcctgaacgccttc
cagctcatgcacagctcccttctggatgtggctcgcttcctggcctcacccggaccgccg
ccgccgccgccgccgcccaaccccgacggcacggctccaccgctgcctcagctgcccaca
agctggactgccacatgcggtttcgacacggaggcgctgttccgccgtgcgtctgtcgta
ccgccggaatggtcgacggcgggatacgcaatgccgctgccgccaataggaggagagtgt
ggccctccaggatcggggaccggagcagccacgacagggacgggactaggaacgggaacg
gatgcgccggtattgcgggcgccaagtttggcgaccaagtctatgaagagcattgtcggt
ggccgggccccagtgttatcggtgcagatgcgggcgtcaaggcggcggtcggccaaaggg
aaagaggacgaggaggaggagtggccggtgacgcaggccgactaccacgcggcgctcctg
gctatggtccaccaagccaaggacctgccgctgctcgcctcaaaaatgggcgccacccac
ctcggggctgccgtctctgcgctactccgctacgagggcggcgagcgcgctaccgccgcg
cttctgacggcgctgccaccgctcgcagcctccaagttcctgtatgaccaggtcgacccg
tcaccgtgcttgctacctccggatgtacggcgacagctgctggccgctatgcctcaggac
aaagtgaaactaatggagatggcagcacgcggcgccagtgatgcggctatcgcgcgggta
cggcaggtccggactgcgctgcatctgtgggcttcccgacggctagtgagctgcgagcag
gtggaggcggtgctgggggcgctgcacacggagggcgaccgcgtggcagccatggtggtg
ctgtggccgcggatggtggacggccggtggaagaaggcgtatttggcgttgaaacagtcg
gagcagcggcaggtcatggtgcggttgggcttctggcacgtgtacacctgcctgggtgac
cctcacggcatcttcttctctctagacttgggggagccagagcagagggacattgcacgg
gagctggtgcgcatggctgtcaaggagaccatgagatcaaagcaggaagcgcgggcacga
ggaggcttctacgcggcgacgttgctggacctacacggcaacggcaacccggtgtcgatt
cccgaggacgagaagctgtggggcatggcggattccaacttcaagactatggacttcctg
tactgtccgaccttcgaacagagccttgagagggtttcgtccagtgccaggcagatccaa
cgctactggtctggactgcaggcacgacggcaagccttactggccagggcgatggcttcc
gagtctgctaccacgttctgctatcgaactttgttacctatcaggacccgtcccgtgcaa
aacctcgttcgcgactgcctcaggagcctcttggggtgccaccgtgaggagctgaagaag
gccgggcggccgttctatgccggggcgtgtgctacg
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