Volvox carteri f. nagariensis: VOLCADRAFT_87378
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Entry
VOLCADRAFT_87378 CDS
T01330
Name
(RefSeq) hypothetical protein
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_trans_1_4
Glycos_transf_1
Glyco_transf_4
Laminin_G_3
Glyco_trans_4_4
Glyco_trans_1_2
GT4-conflict
Motif
Other DBs
NCBI-GeneID:
9620193
NCBI-ProteinID:
XP_002947096
JGI:
87378
UniProt:
D8TL70
LinkDB
All DBs
Position
Unknown
AA seq
1398 aa
AA seq
DB search
MIKSLFHHSRIYYWILLVFAFLVTCSTLLLTYKHHHNTHPEDRSQLFHFGNADWSSAKAS
GTLGHTETSENGSRISQAGPIAEREPCAGAAQGPEPAINDTEMDSSSRSEILQEYRIVDS
VVTLFHQGNHQCGPGSVCLSFLNGGGMSQSLSVAGWVRLDTALDEVFDVTAFSIGPVSLK
FAAPAVPYVGVESAWPDVRRQFEHKPGLRGNCADLTIRSYETQSFDDALRECAQLPGCTV
VTRNSHDLSTFFCLAAYSIDTPDGAWASAVLREAPPFHQYSGAVTVNSWNYFAMTHESGI
LRFYVNGFLRQTMEVSIPEDVTQLDLGRSPRWFESRFPGQIGNIRAWRRQLQPNEVVMSM
STELPTRDHVLNVTASPLWTGPPPIRPTWASLAVPSHVSECDAAVIVPVLERTPFPQLQT
LATHLQHFAGHSCHAKVFMVACSRQDLGNSSLDNLQDAVLLRPDVSLRWDACVQYGLKLA
LAKAYTTPYIAVVAESLVPLYGWLSGLAHDLQLHTDTSAVFAKILFANGTIKSAGSRFEQ
AYDDYLGRQVLRPVEMYAGYPWNYQTTMKTMMIRGAGCSAWLMHSSDFRKILEDGFPSGL
GSNLACSDMALKLQRGGRAVLLSPQGAFVDTAARIQHEDTAALQAFDEVWGADLASQHAL
GLAFNATVSWVMQCGGYEGIKAYNLMQHLEGQLQLRAQIQRGWPFCEHPDVLEGMPLAFT
QRLYRLRRLSAYLPSDIIVHQKDYRQLAAWPWPPSNSSTYLIGRYGWDVDPIHRQWIDQV
KNELDEVWVPSNWHAASLRQQGVRTGKIFVIPESVDSHFYDPDIWEPLTLPRQARLSFLS
SFRLDDHAGWQAVLSAYLTAFRNCTDVSLYINTAMSPELSYKRASIYETMNTFLRSSNDT
YLRSISMYPEPTRGAPHVYVFGRQLTQIELLRIISSVDVVVVPSRGDGWNSLYLEAMSLG
KPLIATTSAGLAEHIQPGFAFQINYTSTEVHGSDTWFRGARWGEPCAEGLIAAFRAAYSS
KSLHAMGREARVRMVKEYDNEVLYCATCGHYCPKAAQLKYFRWYGDTETPPFGMDPTMHV
IRQENYGDYIATARLINDGGFHAAILQHEFGIWGGTAGCLVVCFLKMLEVPAVTVIHTLS
DDRGNSDQYILQQLSAASTAVVVMSESSRNKLGAFHGIPGNNVVVLPHGAPVISAVDPLA
AKAMLNLTGRTVLLTHGLINPMKGVDLVLDALPTIVKEFPAVVYLVVGEPHPDCGWPCAN
HYEQLVKAVSDHRIMDHVRFVTKFLDDRLLLQYVQAADIYVLPYKDRVMTNSGTLTMALA
AGKAIVSTPFDHAASVLPGRGVLVDFESPTSLQEGILQLLRDDGLRVKYQQAARELSSGK
DWRSVAEGYLSLLQNITA
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgataaagtctttgttccatcactccaggatatattactggattcttttggtgtttgca
tttttagtaacctgttcgactttgcttctgacgtacaagcatcaccataacactcatcca
gaggaccgctctcagctctttcatttcggaaatgcggattggtcatcggcaaaagcttcg
ggtactttgggtcataccgaaacttccgaaaacggaagtagaatttcccaagccggtcca
attgcagaaagagaaccatgcgccggggcggcccaagggccggagcctgcaataaatgat
acagaaatggactcgtcctcgagatcagaaatactccaggaataccgcattgtggatagc
gtcgttactctgttccaccaaggcaaccatcagtgtggtcctggttcagtatgcctcagc
tttttaaatggcggcgggatgtctcaatctttgagcgtggcaggttgggtgcgcctggac
acagccctggatgaagtgtttgacgttaccgcattttccattggcccggtgagcctcaag
ttcgcggcgcccgcggtgccgtacgttggcgtggaatcggcgtggcccgacgtgcgaaga
caatttgaacataagcccggcctgcgtgggaactgcgcggatcttaccatacgttcctac
gagacccaatctttcgatgatgctttgcgagagtgtgcgcagttgcccggttgcactgtc
gtcacacggaactcgcatgacctgtccacattcttctgtcttgcggcgtattccattgat
actccagatggcgcctgggcatcggcagtcttgcgtgaagcgcctcccttccaccaatat
tccggggcagtcaccgtaaacagctggaattactttgcaatgacccacgaatctgggatt
ctgcgcttttatgtgaatgggttccttcgccaaacaatggaggtcagcattcccgaggat
gttacacagctggacttagggcgatctccacgctggtttgagagccgctttccgggacag
atcgggaatattcgcgcgtggcgtcgtcagctccagccaaacgaagtggtgatgagcatg
tcaaccgagctccctacaagggaccatgttctgaacgtgaccgcgtcgccactctggact
gggccgcctcccattagaccgacctgggctagccttgcagtgccaagccatgtatccgaa
tgtgatgcggcagtaatagtacctgtactggagcgcacgcccttcccccagctgcagacg
cttgcgacccatctgcagcacttcgctggccactcatgccatgccaaggtgttcatggtt
gcatgctcacgccaggacttgggtaattccagtctggacaaccttcaggatgctgtactc
ctgcggcccgacgtttcactacgttgggatgcatgtgtccagtatggcttgaagctggca
ctagcaaaggcctacacaacgccctacattgctgtggtcgccgagtccctggtgcctttg
tatggctggctgtcagggcttgcgcatgacctgcagctgcatacagacacgtctgcggtt
tttgccaaaatcttattcgcaaacggcacaattaaaagtgctgggtctcgttttgagcag
gcgtacgatgactacttgggacgtcaggtgttgcggcctgtcgagatgtacgcaggttat
ccatggaattaccagacaaccatgaagaccatgatgatacgtggtgcaggctgttcggca
tggcttatgcacagctctgattttcgcaaaattctggaggatggttttccttcaggtttg
ggcagcaacctggcttgctcggatatggcactcaagcttcagcgcgggggccgtgctgtg
ctcctgtctccgcagggtgcctttgttgatactgcagcacgcatacagcacgaggacaca
gccgcattgcaggcgtttgatgaggtatggggagccgatctcgcgtcacagcatgcactt
ggactggcgttcaacgctactgtgagctgggtcatgcaatgtggtggatatgaaggcatt
aaagcttacaacctcatgcagcatctggagggccaactgcagcttagggcgcagatacag
cgtggttggccattctgtgagcatccagatgtcctcgaggggatgccactggccttcacg
caacggctgtaccggcttcggcgcttatcagcatacctgccttcagacatcattgttcac
cagaaggattaccggcagctggctgcatggccatggcccccaagcaattcatccacgtac
ttgattggtcgctacgggtgggatgtcgaccctatccatcgccagtggatcgaccaggtg
aagaacgagttggatgaggtctgggtaccgtccaactggcatgccgcatccctaagacag
caaggtgtcaggacaggcaagattttcgtcattcctgaaagcgtggactctcacttttat
gaccccgacatttgggagccgctcactttaccaagacaagcccggctgtctttcctgtct
tcattccggttggatgaccacgcgggctggcaggcagtgctttcggcgtacctgacggcc
tttcgtaactgcacagatgtttccctatacatcaacacggcgatgtcccccgagctgtct
tacaaaagggcttctatctacgagaccatgaacaccttcctccgttcaagcaatgatacg
tacctccgttccatcagtatgtatcctgagcctacacggggggcaccgcacgtgtacgtg
ttcggccggcaactgacacaaattgagctgctcagaatcatctcttcggttgatgtggtg
gtggtaccgtcccgaggtgacgggtggaacagtctgtacttggaagccatgagcctgggc
aagccactgatagcaaccacctctgctggtttagctgagcacatccagccgggctttgcg
tttcagattaactacacgtctactgaggtgcatggatcagacacgtggtttcgcggagct
cgttggggtgagccgtgtgctgaggggctgatcgctgcattccgtgcggcgtatagcagc
aaaagcctgcatgcgatggggcgcgaggcaagggtaaggatggtcaaggagtatgacaat
gaggtgctctactgcgctacttgcggccactactgccccaaggcagctcagttgaagtat
ttccgctggtatggcgacacagagacgccgccatttggtatggatcctaccatgcatgtt
atacggcaagaaaactatggagactatatcgcgacagctcgcctcataaatgatggtggc
tttcatgcagccatattacagcacgagtttgggatctggggtggtaccgctggatgtttg
gttgtttgctttttaaaaatgctggaggtgccagctgttactgtcattcacacgctcagc
gacgaccggggaaactcggaccaatacattttgcagcaattatcggcagcatccacagca
gttgtcgttatgtctgaatcctcccggaacaagctgggggcgttccacggcatcccgggc
aacaatgtcgtggttttgccacatggagcgccagtgatatctgctgtggacccgcttgca
gcgaaggcaatgctaaacctgactggaaggactgtactgttgacgcacggcctaataaac
cccatgaagggtgttgatctggtgctggacgccttgcccacaatcgtaaaggagttcccc
gccgtggtgtatttagtcgttggcgagccccacccggactgtgggtggccttgcgcaaat
cactatgagcaactggtcaaggctgtttcagatcatcgtatcatggaccacgtcaggttt
gtgaccaaattccttgatgatcggttgttgttgcaatacgtccaggcggctgatatctac
gtcctgccgtataaggatcgcgtcatgaccaactcaggcacccttactatggcccttgcc
gctgggaaagcaatagtgtctacccccttcgatcatgccgcgtcggtgttgccgggccgc
ggtgtgctagtagattttgaaagccccacctcgctccaagaaggaatattgcagctgctt
cgtgatgacggcctcagagtgaagtaccaacaggcagccagagagctgtcgtccgggaag
gattggcggtcagtagccgagggatacttgtcactgctgcaaaatataacggcatga
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