Volvox carteri f. nagariensis: VOLCADRAFT_87398
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Entry
VOLCADRAFT_87398 CDS
T01330
Name
(RefSeq) hypothetical protein
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_trans_1_4
Glycos_transf_1
Glyco_transf_4
Laminin_G_3
Glyco_trans_4_4
Glyco_trans_1_2
GT4-conflict
Motif
Other DBs
NCBI-GeneID:
9620068
NCBI-ProteinID:
XP_002947105
JGI:
87398
UniProt:
D8TL89
LinkDB
All DBs
Position
Unknown
AA seq
1540 aa
AA seq
DB search
MGRSSLRIVHPHKFFYFCSYKCSWVLLALAFLITCSTWLTTHKYHHQLEDRSQFLTCLSG
DCFITLFSGLFDQRNFQCGAGSVCHTFNNGGGVPKSWSVAGWVRLDTALDEVFDVTAFSI
GPVSLKFAAPAVPYVGVESAWPDVRRQFEHKPGLRGHCADLTIRSYQTQSFDDALRECAQ
LPGCTVVTRNSHDLSTFFCLAAYSIDTPDGAWASAVLREAPPFHQYSGAVTVNSWNYFAM
THESGILRFYVNGFLRQTMEVSIPEDVTQLDLGRSPRWFESRFPGQIGNIRAWRRQLQPN
EVVMSMSTELPTRDHVLNVTASPLWTGPPPIRPTWASLAVPSHVSECDAAVIVPVLERTP
FPQLQTLATHLQHFAGHSCHAKVFMVACSRQDLGNSSLDNLQDAVLLRPNVSLRWDACVQ
YGLKLALAKAYTTPYTAVVAESLVPLYGWLSGLAHDLQLHTDTSAVFAKILFANGTIKSA
GSRFEQAYDDYLGRQVLRPVEMYAGYPWNYQPTMKTMMIRGAGCSAWLMHSSDFRKILED
GFPSGLGSNLACSDMALKLQRGGRAVLLSPQGAFVDTAARIQHEDTAALQAFDEVWGADL
ASQHALGLAFNATVSWAMQCGGYEGIKAYNLMQHLEGQLQLRAQIQRGWPFCEHPDVLQG
MPLAFTQRLYRLRRLSAYLPSDIIVHQKDYRQLAAWPWPPSNSSTYLIGRYGWDVDPIHR
QWIDQVKNELDEVWVPSNWHAASLRQQGVRTGKIFVIPESVDSHFYDPDIWEPLTLPRQA
RLSFLSSFRLDDHAGWQAVLSAYLTAFRNCTDVSLYINTAMSPELSYKRASIYETMNTFL
RSSNDTYLRSISMYPEPTRGAPHVYVFGRQLTQIELLRIISSVDVVVVPSRGDGWNSLYL
EAMSLGKPLIATTSAGLAEHIQPGFAFQLNYTSTEVHGSDTWFRGARWAEPCAEGLIAAF
RAAYSSKSLHAMGREARVRMVKEYDNEVVSNMVLKRLKEISEYQLSRPRTARSLDLAKDP
VPTDVHICAMLPKASIRVHRTTPALKIAVVSTAPPRRCGIATFNTALLRYLRPLLPQGSS
VEVFPLVGDMEAAPFGMDPTMHVIRQENYGDYIATARLINDGGFHAAILQHEFGIWGGTT
GCLVVCFLKMLEVPAVTVIHTLSDNLGNSDQYILQQLSAASTAVVVMSESSRNKLGAFHG
IPGNNVVVLPHGAPVISAVDPLAAKAMLNLTGRTVLLTHGLINPMKGVDLVLDALPTIVK
EFPAVVYLVVGEPHPDCGWPCANYYEQLVKAVSDHRIMDHVRFVTEFINDQLLLQYVQAA
DIYVLPYKDRITTNSGTLTMALAAGKAIVSTPFDHAVSVLPGRGVLVDFESPTSLQEGIL
QLLRDDGLRVKYQQAARELSSGKDWRSFKRLPFFVYAYVSSENPPPLSLCSARCRYLVFH
RRHDLLYMRHPPLLPPSPPLPAAEQQQEQKQLPRGPSASQLQLRPSVTGSLASRLGAVTM
EIQQYGSTQVMPMDAVRNCFSKLLVPLARQHSGAEDCEPN
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atgggacgatcctctcttcggatagtacaccctcataagtttttttatttctgttcgtat
aagtgctcttgggttctattggcgcttgcgtttttgatcacctgttcgacatggcttaca
acgcacaaataccaccatcagttagaggaccgctcacaattcctcacttgcctcagcggg
gactgctttataaccttgttcagtggcttgtttgaccagcgcaacttccagtgcggtgct
ggttcagtatgccacacctttaacaatggcggcggggtgccgaaatcttggagcgtggca
ggttgggtgcgcctggacacagccctggatgaagtgtttgacgttaccgcattttccatt
ggcccggtgagcctcaagttcgcggcgcccgcggtgccgtacgttggcgtggaatcggcg
tggcccgacgtgcgaagacaatttgaacataagcccggcctgcgtgggcactgcgcggac
cttaccatacgttcctaccagacccaatctttcgatgatgctttgcgagagtgtgcgcag
ttgcccggttgcactgtcgtcacacggaactcgcatgacctgtccacattcttctgtctt
gcggcgtattccattgatactccagatggcgcctgggcatcggcagtcttgcgtgaagcg
cctcccttccaccaatattccggggcagtcaccgtaaacagctggaattactttgcaatg
acccacgaatctgggattctgcgtttttatgtgaatgggttccttcgccaaacaatggag
gtcagcattcccgaggatgttacgcagctggacttagggcgatctccacgctggtttgag
agccgctttccgggacagatcgggaatattcgcgcgtggcgtcgtcagctccagccaaac
gaagtggtgatgagcatgtcaaccgagctccctacaagggaccatgttctgaacgtgacc
gcgtcgccactctggactgggccgcctcccattagaccgacctgggctagccttgcagtg
ccaagccatgtatccgaatgtgatgcggcagtaatagtgcctgtactggagcgcacgccc
ttcccccagctgcagacgcttgcgacccatctgcagcacttcgctggccactcatgccat
gccaaggtgttcatggttgcatgctcacgccaggacttgggtaattccagtctggataac
cttcaggatgctgtactcctgcggcccaacgtttcactacgttgggatgcatgtgtccag
tatggcttgaagctggcactagcaaaggcctacacgacgccctacactgctgtggtcgcc
gagtccctggtgcctttgtatggctggctgtcagggcttgcgcatgacctgcagctgcat
acagacacgtctgcggtttttgccaaaatcttattcgcaaacggcacaattaaaagtgct
gggtctcgttttgagcaggcgtacgatgactacttgggacgtcaggtgctgcggcctgtc
gagatgtacgcaggttatccatggaattaccagccaaccatgaagaccatgatgatacgt
ggtgcaggctgttcggcatggcttatgcacagctctgattttcgcaaaattctggaggat
ggttttccttcaggtttgggcagcaacctggcttgctcggatatggcactcaagcttcag
cgcgggggccgtgctgtgctcctgtctccgcagggtgcctttgttgatactgcagcacgc
atacagcacgaggacacagccgcattgcaggcgtttgatgaggtatggggagccgatctc
gcgtcacagcatgcacttggactggcgtttaacgctactgtgagctgggccatgcaatgt
ggtggatatgaaggcattaaagcttataacctcatgcagcatctggagggccaactgcag
cttagggcgcagatacagcgtggttggccattctgtgagcatccagatgtcctccagggg
atgccactggccttcacgcaacggctgtaccggcttcggcgcttatcagcatacctgcct
tcagacatcattgttcaccagaaggattaccggcagctggctgcatggccatggccccca
agcaactcatccacgtacttgattggtcgctacgggtgggatgtcgaccctatccatcgc
cagtggatcgaccaggtgaagaacgagttggatgaggtctgggtaccgtccaactggcat
gccgcatccctaagacagcaaggtgtcaggacaggcaagattttcgtcattcctgaaagc
gtggactctcacttttatgaccccgacatttgggagccgctcactttaccaagacaagcc
cggctgtctttcctgtcttcattccggttggatgaccacgcgggctggcaggcagtgctt
tcggcgtacctgacggcctttcgtaactgcacagatgtttccctatacatcaacacggcg
atgtcccccgagctgtcttacaaaagggcttctatctacgagaccatgaacaccttcctc
cgttcaagcaatgatacgtacctccgttccatcagtatgtatcctgagcctacacggggg
gcaccgcacgtgtacgtgttcggccggcaactgacacaaattgagctgctcagaatcatc
tcttcggttgatgtggtggtggtaccgtcccgaggtgacgggtggaacagtctgtacttg
gaagccatgagcctgggcaagccactgatagcaaccacctctgctggtttagctgagcac
atccagccgggctttgcgtttcagcttaactacacgtctactgaggtgcatggatcagac
acgtggtttcgtggagctcgttgggctgagccgtgtgctgaggggctgatcgctgcattc
cgtgcggcgtatagcagcaaaagcctgcatgcgatggggcgcgaggcaagggtaaggatg
gtcaaggagtatgacaatgaggtggtgagcaacatggttctgaaaaggctaaaggagatc
agtgaataccagctttcgcgccctcgcacagcgagatccctggatttggcgaaagaccca
gtaccaaccgatgtgcacatatgtgccatgctccctaaggctagtatccgtgtgcaccgg
acaacaccagccctgaagattgctgtggtgtcgacagcacctccacggcggtgtgggatt
gctaccttcaacacagctctactgcgctacttgcggccactgctgccccaaggcagctca
gttgaagtatttccgctggtcggcgatatggaggcggcgccatttggtatggatcctacc
atgcatgttatacggcaagaaaactatggagactacatcgcgacagctcgcctcataaat
gatggtggctttcatgcagccatattacagcacgagtttgggatctggggtggtaccact
ggatgtttggttgtttgctttttaaaaatgctggaggtgccagctgttactgtcattcac
acgctcagcgacaacctgggaaactcggaccaatacattttgcagcaattatcggcagca
tccacagcagttgtcgttatgtctgaatcctcccggaacaagctgggggcgttccacggc
atcccgggcaacaacgtcgtggttttgccacatggagcgccagtgatatctgctgtggac
ccgcttgcagcgaaggcaatgctaaacctgactggaaggactgtactgttgacgcacggc
ctaataaaccccatgaagggtgttgatctggtgctggacgccttgcccacaatcgtaaag
gagttccccgccgtggtgtatttagtcgttggcgagccccacccggactgtggctggcct
tgcgcgaattactatgagcagctggtcaaggctgtttcagatcatcgtatcatggaccac
gtcaggtttgtgaccgagttcatcaatgatcagttgttgttgcaatacgtccaggcggct
gatatctacgtcctgccgtataaggatcgcatcacgaccaactcaggcacccttactatg
gcccttgccgctgggaaagcaatagtgtctacccccttcgatcatgccgtgtcggtgttg
ccgggccgcggtgtgctagtagattttgaaagccccacctcgctccaagaaggaatattg
cagctgcttcgtgatgacggcctcagagtgaagtaccaacaggcagccagagagctgtcg
tccgggaaggattggcggtcgtttaagaggctgcccttcttcgtatacgcctacgttagc
tcggagaaccctccacccttgagtttatgcagcgcccgctgccgttatttagtattccat
cgacgccacgatctattgtacatgcgacatccgccgctactgccgccctcgccgccgctg
ccagcagcggagcagcagcaggaacagaagcagctgccgcggggcccgtctgcctcgcag
ttgcagctacggccatcggtaacgggatcgctggcgtccaggctgggagccgtaaccatg
gagattcagcagtacggcagtacgcaagtcatgcccatggatgccgtacggaattgcttt
tcgaagcttctagtgcccctggctaggcaacacagcggtgcagaagactgcgagccgaac
taa
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