Volvox carteri f. nagariensis: VOLCADRAFT_88920
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Entry
VOLCADRAFT_88920 CDS
T01330
Name
(RefSeq) hypothetical protein
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tyr-DNA_phospho
SRCR
SRCR_2
Hepsin-SRCR
Kazal_2
Motif
Other DBs
NCBI-GeneID:
9627317
NCBI-ProteinID:
XP_002948498
JGI:
88920
UniProt:
D8TQB2
LinkDB
All DBs
Position
Unknown
AA seq
1521 aa
AA seq
DB search
MVAIPASPCSEHQSNHATRFFILGAREDSVVELRPHTAAAAAAPAAADTAASQPPPQQDQ
RSLDLDTVTSTSMDGATAAATAAATGKTPAAATSVPSRQQLTRQGPRPTAPPHDGAPYDI
DSPVHLLRVRGLSPRYNTGCLGVDLRHVVSGPLQLALVSNYMIDMGWLLSCCPDLAKARQ
FFVVHGEGPDAEPEMRQQAAEAGAAHVRLHRPPLPIMYGTHHSKAFLLAYSTGLRLIIHT
ANCVYPDCNDKTQGLWVQDFPRKDTVAAAAPVSTFEQDLVAYFRALALPPAMANPLFEAI
AMHDFSFARGTLVASVPGYHRGTAAVQSYGHMRLRRLLEQVPLPSCFAAEGSSCGTASSS
SAVPPEGLIIQCSSMGSFDQAWLVDEMGASLAACRRQPPPPPPPPRPLAAAPPPRPSGPP
GCGPLPLAVVWPTVEEVRNSIEGWNAGRSIPGPSRNVSKPFMGRYYARWGGEAVGRQRAM
PHIKTYTRYRGQQLAWFLVTSHNLSKAAWGELQKNGSQLMIRSYELGVLVTPALEAAYRA
KGLSATCLASQISERYLANARGGASVIVVRMLRPVFAALSAPLPALWYRLTIGQSSCSFC
FDEDYGPVCTTAGVTLPSACLAACQGLRVARKGLCQGSDPLPKSLAVNYGPPPAFWGPSG
DDGSGSGSGSGGGGGGDATPPLAESGRSARSAVDDDVIMRFVDDSFVYVGHAVMRDTAPS
GVESSGFVGSLAGGTGYRDFTFSPGKVGYSSPLGVIRAQYVTFYRAEYPRIDKDGVNYFD
MALIRMQAPSLSYMGLKYSCTKTDYPKVQTCGYPYDRTGFYLQKCDDCYYTSNACNPMVQ
PINWCFTVGGQSGSAIYDLSDYQILGILSGGPNSGMYFMEYSVWTPIDAIHFASLKRWLW
KSGTPAAAAPLTPPLAPAVQAPYTAEPCGAQGLLRLVASSDVGSGRVEICYNGVWGTVCS
SSSFNNANARVVCRSLGFLTGSWVVPTFFNPADLRQSTWVELGCTGNENGIFECPPLSNG
NWSVGTSCATHETADLSVMCRNTNEVSGSGTTPDFNRTTGFFPCTNNGAVRLRDNLVNSS
GRVEYCNDGRWGTICHDGWDDRDATVVCRQLGYRYGIAQKGLLANGASPPGSALMRIWMQ
QVNCSGSEAQLQDCGTLVPLGATDCSHRADAGVMCANTPFAAPGVPYYPSDCSEPGALRV
VDDGDDGVISGYPGMVGGRLEVCYAGQWGAVCEPNFNDPDARVACRQMGFGFGRAVPATR
QPGSTPGDLRLRGGVADNLGRLEVCSSGAWGSVCEDGFGQPEADVACRLDVGVVCFKGPQ
QPLPAAVPPPPADPYACPVPGQARVVDVLDRVTFGAGRLEICLNGVWGTRCGCGGFGNAS
NQHCSPRMHHFWECPVAQAVREQIDRHIQPSQEAATGGITRKQLWLVQAPTGCEQAPWDV
IALAALSAMEVCGQGFGTTNAIVACRHLGFTTGVVVYADDPNGFGSGSHLEPVHLGSITC
KGQEDRLTSCPSRPVPDCPHA
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccataccagcgtcaccttgcagtgaacatcaaagtaaccacgcgacacgtttc
ttcattctaggcgcccgagaagactccgttgtggagctaagaccgcataccgccgcagcc
gcggccgcccctgccgccgccgacaccgcggcgtcacagcctccgccgcagcaggaccag
cggtcgttggacctcgatacggtgacatcaacatcaatggacggcgccactgccgctgcc
actgccgctgccactggcaaaacgccggcagcggccacaagtgtcccttcgcgacagcag
ctcacccggcagggacctcgtccgacagccccgccacatgacggcgctccgtacgacatc
gatagtcccgtacacctgctgcgggttaggggtctatctccccgctacaacaccggctgc
ctgggtgtcgacctgcgacacgtcgtgagcggtccactgcaactcgctcttgtgtccaac
tacatgatcgacatgggctggctcctgtcgtgctgcccggacctggctaaagcacgacag
tttttcgtcgtgcatggggagggcccggatgcggagcccgagatgcgacaacaggccgct
gaagcgggtgcggcgcatgtacgactgcaccggccgccgctgcctatcatgtacggcaca
caccactccaaggccttcctcctagcctactctacgggtctccgcctcatcatccacacg
gccaactgcgtctacccggactgcaacgacaagacacaagggctgtgggtgcaggacttt
ccacggaaggatacggtggctgcggccgcaccggtgtcgactttcgaacaggacctggtc
gcgtacttccgcgcactggcgctgccgccggcgatggctaatcccctgttcgaggccatc
gcaatgcatgatttttcttttgcgcgcggcacactagtggcgagcgtgccgggataccat
cgcggcacagcagccgtacagtcgtacggtcacatgcggttgcgccggctgttggagcag
gtgccgctgccaagttgttttgctgcggagggcagcagctgcggtacggcatcgtcatcg
tctgccgtaccgcctgagggccttatcattcaatgctcgtccatggggtcgtttgaccag
gcgtggctggtggacgagatgggagcttcgttggcggcctgtcgacggcagccgccgccg
ccgccgccgccaccgcggccgctggcggcggcgccgccgccgcgaccgtccgggccgcca
ggctgtggtccgctaccgctggcagttgtatggcccacggtagaggaggtacggaacagc
attgagggctggaacgcgggccgcagcatcccaggtcctagtcgcaacgtctccaagccc
ttcatgggcaggtactatgcacgatggggcggcgaggcggtaggccggcagcgggccatg
ccccacatcaagacctatacgcggtaccggggccaacaactggcctggttcctggtaacc
agccacaacctgagcaaggcggcctggggtgaactccagaagaacggctcacagctcatg
attcggtcgtacgagttgggcgtgctggtgacgccggcgctggaggcggcgtacagggcg
aagggcctcagcgcgacgtgcctggcctcccaaatttccgagaggtacctggccaatgcc
aggggtggcgcctcagtcatagtggtgcgcatgctgcgccccgtctttgctgcgctgtca
gcgccccttcctgcgctttggtaccgcttgacaattggtcaatccagttgcagcttctgc
ttcgacgaggattacggtccagtttgtaccacggccggcgttaccctcccatcggcttgc
ctggcggcctgtcaaggccttcgggtagcccgaaaaggactttgccaaggatcggatccc
cttcccaagtcactggcggtaaattacggaccgccgccagcattctggggcccttctggc
gacgacggcagcggcagcggcagcggcagcggcggtggcggtggtggtgatgccacgcct
ccgttggcggaaagcggacggagcgctcgttccgccgtcgacgatgacgtcatcatgcgc
ttcgtggacgactcctttgtgtacgtgggacacgccgtgatgcgggatacagccccaagc
ggcgttgagtcatccggcttcgtggggagcctagccggcggcaccggttacagggacttc
actttttcgcctgggaaggttggatacagctctccattgggcgtcatcagagcgcagtac
gtcacgttttacagagctgaatatcctcggatcgacaaggacggcgtcaactacttcgac
atggcgctcataaggatgcaggcacccagcctgagctatatggggctgaagtactcgtgt
actaagacggactatcctaaggtacaaacttgcggctacccgtacgaccggactggcttc
tacttacaaaaatgcgacgactgctactacacctcaaatgcctgcaaccccatggtgcag
cccattaactggtgcttcactgtgggaggtcagtcagggtccgccatctacgacctgtca
gattaccaaatcctgggaatcctaagcggtggtcccaattcgggaatgtacttcatggaa
tactcggtctggactccaatcgacgccatccactttgccagcctaaagcgctggttgtgg
aagtcgggtacgcccgccgccgcagcgccgcttacgccaccgttggcgcctgccgtacag
gcaccgtacactgcagagccatgtggcgcacagggtcttctgcggctggtggcgtcatca
gatgtcggctccgggcgagttgagatttgctacaacggcgtctggggaaccgtctgtagc
tccagttcctttaacaacgccaacgcccgagttgtatgcaggagcttaggattcctaacc
ggcagttgggtagttcccacgttcttcaaccccgcggacttgaggcagagcacctgggtg
gagctgggctgtacgggcaatgagaacgggatcttcgaatgccctcccctgagcaacgga
aactggagcgtggggacctcctgcgcaacacacgaaacagcagacctgagtgtcatgtgc
cgaaacacaaacgaggtgtctggctccggaaccaccccggacttcaaccgtacaacgggc
tttttcccatgtacgaacaacggtgccgtacggctacgtgacaacctggtaaacagctca
ggtcgtgtggagtactgcaacgacgggcgctggggcaccatctgccacgatggctgggac
gaccgtgacgccacggtggtgtgccgtcagttgggctatcggtacggcatcgcgcaaaaa
ggcctcctagcaaacggtgccagcccgccaggatctgcgctcatgagaatctggatgcaa
caggtcaattgcagcggatccgaagcccagctgcaggactgcggcaccttggtgccctta
ggcgccactgactgcagccatcgtgcggatgcgggtgtcatgtgcgcgaacacgccgttc
gccgcaccaggagtgccgtactacccctccgattgctctgaaccgggggccctgcgggtg
gtggatgatggcgacgacggtgtcatctcggggtatcctggcatggttggcggtcgattg
gaagtgtgctatgcggggcaatggggcgccgtgtgcgaacccaacttcaacgaccctgat
gcgcgcgtggcttgccggcaaatgggttttggctttgggcgtgcagtgcccgcgacccga
caaccaggctccacgccgggtgatcttcgactacgtggaggcgtggctgacaacctgggc
cgacttgaggtgtgcagttcgggagcttggggctccgtctgcgaggacggcttcggacaa
ccggaggcagatgtagcttgcaggctggacgtgggcgtggtctgttttaagggcccacag
cagcccctcccagcggctgtgccgccccccccggctgacccgtacgcctgcccggtgcca
ggacaggctcgtgtggtagacgtactcgatcgggtgacctttggcgcgggccgcttggag
atctgcctaaacggcgtctggggcacgcgctgtgggtgtggagggttcggcaacgccagc
aaccagcactgctccccacgcatgcaccacttctgggagtgccccgtcgcacaagctgtc
cgggagcagattgatcgacacatacagccctcccaggaggcagcgacaggcggcatcacc
cggaagcagctgtggctggtccaagccccgaccggctgcgagcaggccccctgggatgtg
atcgccctggcagccctgtctgccatggaggtttgcggccagggcttcgggaccacaaat
gccatagtcgcgtgcaggcatctaggcttcacgacaggcgtcgttgtgtatgccgacgat
ccgaatggtttcgggtccggcagccatttggagcctgtacacctgggctccatcacttgc
aagggacaagaagatcggctcacaagctgccccagcaggcccgtcccggattgcccccat
gcgtaa
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