Volvox carteri f. nagariensis: VOLCADRAFT_90133
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Entry
VOLCADRAFT_90133 CDS
T01330
Symbol
Ofd1
Name
(RefSeq) basal body protein
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LisH_2
HIP1_clath_bdg
LisH
FOP_dimer
Motif
Other DBs
NCBI-GeneID:
9618831
NCBI-ProteinID:
XP_002949660
JGI:
90133
UniProt:
D8TTK1
LinkDB
All DBs
Position
Unknown
AA seq
1230 aa
AA seq
DB search
MSEPGDAREGHLDQAEFKKKMLSQLQTAGVVGQSQLRAQLLSALKKGQVVQLGPPPGDKP
GLKRHALNSMIADYLAAVQYNYSLSVFKEESGIEARPLLTEDEVLDVLKVDRDASFYQSY
MKSKAHAGPGSCVILNLLSAISEAAAAKGKESFTQTIGGDRYQLEVRMMQLENEYQSRLR
EARMGPGAGLEERLALYRQEIEEQAEAEVARQVERIREMEVAAARLDEASKARRAMEAER
LELDRLHSERLTKLRQREEEMMDKLRRQQRDVENVAYEHRQRILREEERMRNQKTEMQQQ
LDARQEQLKQLERSLELRERAVAAREAAAEKKLAEATEVVAEAQVAARQDVEREYLELKN
GVAQQRLQLEMDRARMQELRSEAMADLAAARAKDDRLRALETARAEAEARAAAHAADAEV
CRLQAEKLALELNQARDELSRRVVQAAEGAEAMLQNAAGAMNMLNTEALASRHAGTQIRE
VVSQLERAKEEATAQVTELQQERGSLQITVAALGAEADALRNQLGRVEALLDEAVSARAA
ALSNLEESQFRAFQQERELSELRNALLRAKEELAALRMQLAMRRPPSRGPDSPGRRSITV
SPTRRPPPGGGAAAISALSLGIALGGGPGGSLGAAGSYGSQQQQQQHHHHHQNQHSPPQH
APWHYHPSASGSMAGGTPALSNLEFPIAAVPRDPTQERLERLRRQEDIMARQEDTFRKRM
AVLQEPPPQQQQQSAAEAQEQADEEERAFAYHRDQQIIRQQQQQQLQYYFSRPSPFQQHE
HHQQAQEQQQQQYQDSAEYHYGGPEFETAQQQQLPRQHTPHDGSAAAAVVPVAEPSGPTS
HSSSTIQPVSQPPQQQQQEHPAHISTRSTGHGVAAPPPQQQPPQELPYLSQVAGGMPLGA
QPHVPAEPLAPPPPPPPPAGMGSPLPLALPADPAPLAPLASPALVAPPGLVFTSDLGTRA
PASPAAEAHPPAAEPRKPTIPGLVIVSGFAPRSSPEPPQPPPPEGRSEELDSHSEPLDLA
NVMQAKMRMLQEQRERALAAQRQQQQQQHPPPLERRLSRNSHSSRYSGEVRFLGTTGGVG
GMSMEASSPPGAGASGGLAAHVEDSTSDIVAGEEYDTVAPELSTLHRRGRRSHEGGTGHL
SRQSSVSRRELVRGTSIARSEASALSMEVPGLGGPSMRALSTVLTLDDNLSSLEGFEVRG
LDDDDDDGVEGPVSEGVGAFAAEFSANSVF
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcctggagatgcacgggagggtcacctggaccaggcggagtttaagaagaag
atgctgtctcaactgcagacagctggtgttgtcgggcagtcacaacttcgagcgcagttg
ctctccgcactcaaaaaagggcaggttgtgcagcttgggcccccgcccggggacaagccg
ggactgaagcgccacgcgctgaacagcatgattgcggactacctagctgccgtacaatac
aactactcactgtctgttttcaaagaggagtctggcattgaggcgcgcccgttgctaacc
gaagatgaagttttggatgtgctcaaagtagatcgtgacgcgtccttctaccagtcctac
atgaagtctaaagcgcacgctggccccggctcctgcgtcatcttgaacctcctctcggcc
atctccgaggcagcggcggccaaagggaaggagtccttcacacagaccattggcggtgac
aggtatcagttggaggtgcgcatgatgcagctggagaacgagtaccagtctcgtctgcgt
gaggcccggatgggcccgggggcggggctggaggagcggctcgctctgtaccgtcaggag
attgaggagcaggcggaggcggaagtggcgcggcaggtggagcgcattcgtgaaatggag
gtggcggcggctaggctggacgaggcgtctaaggcccgtcgagctatggaggcggagcgg
ttggagttggatcgcctgcacagcgagcggctgaccaaactgcggcagcgcgaggaggag
atgatggacaagctgcgacggcaacagcgtgacgtggaaaacgtggcctatgagcaccgc
cagcggatccttcgcgaggaggagcgtatgcgcaaccagaagaccgaaatgcagcagcaa
cttgacgcccggcaggagcaactgaagcagctggagcggtcgctggagctgcgcgagcgc
gcggtggcggctcgggaggcggcagcggagaagaagctggcggaggccacggaggtggtg
gcggaggcgcaggtggcggctcggcaggacgtggagcgcgagtacctggagcttaagaac
ggcgttgcgcagcagcgcttgcagctggagatggacagggcccgcatgcaggagctgcgc
tctgaagccatggcggacctggcggctgcacgagccaaggacgatcggctgcgcgcgctg
gagactgctcgggcggaggcggaggcccgcgcagcagcgcacgcggccgacgccgaagtg
tgccgattacaggctgagaagctggccttggagctcaatcaggcacgcgatgagctcagt
cgccgcgtggtgcaggcagccgagggcgcagaagccatgttgcagaacgcggcgggtgcc
atgaacatgctcaataccgaggcattggcctctcgtcatgcgggcacccagatccgggag
gttgtgtcccagctggagagggccaaggaagaggccacggcccaggtcaccgagcttcag
caggaacgcgggtcgctgcaaatcacggtggcagcgttgggtgcggaggcggacgcgttg
cgcaatcagttgggccgcgtggaggcactcctggatgaggcggtctcggcccgcgctgca
gcgctctcgaacttggaggagagccagttccgcgcgttccagcaggagcgagagctgtcc
gagctgcggaacgcgctgctgcgggcaaaagaggagctggcggcgctgaggatgcagttg
gcgatgcggcggccgccgagcaggggccccgacagcccgggccgtcggagcatcaccgtc
agccctacgaggcggcccccaccgggtggcggcgccgccgcaatctccgccctcagcctc
ggcatcgctttgggcggcggacctggagggtcccttggagctgccgggagctacggatcc
caacaacagcagcagcagcaccaccaccaccaccagaaccagcattcaccgccgcaacat
gcaccctggcactaccacccaagcgcctccggctcgatggcgggcggtacacctgcgctg
tccaatctggagttcccgatcgcggcggtgccccgggaccccacccaggagcggttggag
cggctccgccgtcaggaggacatcatggctaggcaggaggacaccttccgtaagcgaatg
gccgtcctgcaggagcctcccccgcaacaacagcaacagtccgcagctgaggctcaggag
caggcggacgaggaggagcgagcttttgcgtaccaccgagatcaacaaatcatccgtcag
cagcaacaacaacagctgcaatattatttctcgaggccgtcgcccttccagcagcacgaa
catcaccaacaggcgcaggagcagcagcagcaacaatatcaagattcggccgagtaccat
tacggcggccctgaatttgaaaccgcccagcagcaacagcttcctcgccagcacacccca
cacgacggctcagcggcagcagccgtggtaccggtggcagagccctcaggaccgacatcc
cattcctcatccaccatacagcctgtgtcgcagccaccgcagcagcagcagcaggaacac
ccggcccacatttctacacgttccactggccacggtgttgcagcgccgccaccgcaacag
caacccccgcaggagctcccttacctctcccaagtcgccggcggcatgccgctcggggca
caaccgcatgtccccgcagagccgttggccccaccaccgccgccgccgccaccggcggga
atggggtcacccctgccgctcgcactacccgcagacccggcccccctcgcaccccttgcc
tcgcctgcgctggtagccccgccaggcctcgtcttcacctctgatctcgggacgcgcgcc
cctgcttcccctgcggcggaggcacacccgccagcggccgagccgcgcaaaccgaccatt
cccggtctggtcatcgtcagtggctttgcgccgcggagctcgccggagcctccgcaaccc
ccgcctccggaggggcgatcagaggagctggactcgcactctgagccactggacctagcg
aacgtaatgcaagccaagatgcgcatgctgcaggagcaacgcgaacgtgcactcgccgct
cagcggcaacagcagcagcagcagcaccctccgccactggagcgccgtctctcccgcaac
tcccactccagccgatacagcggggaggtgcggttcctcggcaccactggcggcgttggc
ggcatgagcatggaggctagcagtcccccaggcgccggcgcaagtggcggccttgcggcg
cacgtggaggacagcaccagcgatattgtggcgggcgaggagtacgatacggtggctccg
gagctctccacgttgcaccggcgagggcggcggagtcacgagggcggcaccgggcacttg
tcccggcagagcagcgtgagccggcgcgagctggtgcgcggcacgtccatcgcgaggtcc
gaggcgagtgctctcagcatggaggtacctgggctggggggacccagcatgagggcgctc
agcaccgtcctgacgctggacgataatctgtcctccctggagggcttcgaggtgcgcggc
ctggacgacgacgacgacgacggtgtggagggccctgtgagcgagggcgtcggcgccttt
gcagctgagttttctgctaacagcgtcttctaa
DBGET
integrated database retrieval system