Volvox carteri f. nagariensis: VOLCADRAFT_90340
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Entry
VOLCADRAFT_90340 CDS
T01330
Name
(RefSeq) hypothetical protein
Organism
vcn
Volvox carteri f. nagariensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chlam_PMP
CarS-like
Motif
Other DBs
NCBI-GeneID:
9619042
NCBI-ProteinID:
XP_002949872
JGI:
90340
UniProt:
D8TU42
LinkDB
All DBs
Position
Unknown
AA seq
1646 aa
AA seq
DB search
MGWSRRPMLPACSFIVGLQGLLTLWAAVARASLPFPIEPTVACYITITGEPATRDAWRPS
VVSLECINTLNPGVPVNVTVGTRLLQYIRPTTPMEHDGSPPDSDETQSSPPSLNNPPFSP
SGVVMVSGVEVFESASDSGWSIVFNDQIQHLQLENSVLRGTPLSYDPLISCPSCKYVTVA
NVTMEELYGAAVEPVGDYCWGRTVGALSFGGVLEAYVDRLTCTNVQGATDFACIWLGLLL
NMQRDADNGASPPAGNTDISSEEDGAQLDRIIRISNSVFVNNSVTAGDCIAWSSSDLLGF
GAVVVYTPYPGGSSLNSVDLFDTVISGNKGGFGSGLAFFADSNGGPADYMHVGVLNISRS
SLEMNTATKHGGAVFMNVFSHLEVLHITQGSKVDGNSANGPGGSGGAVHLANEIGNLTVE
GSSSVSDNTAAESGGAFFVLSYIQQVSILSGSTVSGNQATSGGGGAVLVQNAGQADTPLN
ITVHGSSHVDGNMAAKCGGAFGILANVASFQVAQGSSLNNNTVGVSDGAQEELRGGAVYI
GSCSAEGLQASSGNISRLLVSDSSSISYNVALYQGGAVFVEQDVIDGITIEGGSQANNNS
VTGPIAEGGGAIAVYGSCSSLTIQNSSSISGNMAAGDITYEKGSQGGGVWIGGLLRKLVL
TGGSRVSWNKAWNGGSAIVSGMSAEEELADVKHVMELLEVSNNSCICNNTAGQYRSSLYG
AMYFRNTRVVNFTVTDRSCMCSNKVQSGSGFGGAVYAGKGLESFRICHGSSVSDNQGGNG
GAIYIPNVQLVDDDANGTKLLPLQRFELCGGSRMDGNLAGISGGAIFMEGPAGEIIISNS
SISHNQALVTGGAIHLTAMPKNLSISDSNLFNNSAMFGEGGFMHLMVVPGSEGQVSGYSS
GISNSDTSQKLPDDGPYYLNIARSSISENSALKDGGAISINLRHWIRTVPDDMKRLQLQK
DRVLYLKIADSTWDSNWAHYGAGGALAFLSLTPVLSTQQRMASVFMGARINITNTTFHTN
TAGDDSTRLLYIQDVSPLRGNGGALFIWAEPFLLEDSPSEKKLLTNQTGYIMYDKSSGCD
TTEADLVPGIQAFSNMTCWPEGSQACGVRLEGVSIRDNMAKGGYGGGFLLAHCAAKIINS
NFNNNGADLDGGGFAFMDYAIPAYVSQPSYVPTTKDSSSSNNSNPSSPSRASPPLNRPPQ
ISRPPPPVALGQPKNVSRGCITFPGVTVTVQAQLPSLEARQNIDMTKLPRQPWVVVQRTA
FTQNSARNGGGVFLEANKTAAVILDCTLADNAAQVQGGGAMLIGASTFAQVTAVLRNTTF
EDNEAGTVGGGLAVQLTRSRAAVVLFNDTFKGNSATRGGGLFNSGVKGSSLLAWGCILHD
NTANYGGGAALDYVVASASSSNLNTSPSPPPSPRPPSPAPAPPRPPRPPPPPPPINNIPA
FTPVTAIVHFQQCRFTENQVLLSGGGIYLAAAGQNVLTLLEQSEVSLNSAALGGGIYLNA
TDGCIMRVSSCSITNNTANLQGGGAYSATTCGGQLMVGNGSYWSGNTAGVYGGAIMVNSA
DIVRVNRSANVTDASVLLANTTIGAQAGNSTSNQTLFSCQKPSLDIANSTVVLNTAQQGD
GIYAAKLAIDVEYSKLVEHVRKYVCL
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atggggtggagtcgtcggccgatgcttccagcctgttcgttcatcgtcggtctacaaggt
ttgctaacactgtgggcagccgtcgcgcgtgcgagtcttcccttccccatcgagcccacc
gtggcctgttacatcacgatcactggcgagcccgccacacgggatgcatggaggccctca
gtggtcagccttgaatgcattaacactctaaacccaggcgtccctgtaaacgtaaccgtc
ggaacgcggcttctgcagtacatccggcctacaacgcccatggaacacgacggctcgccc
ccagacagtgatgagacgcagtccagcccgccatcgctcaataacccacctttttctcca
agcggcgtcgtgatggttagcggggttgaagtgttcgagtcagcgagtgacagcggctgg
agcatcgtgtttaatgaccaaattcagcatctgcagctggaaaattctgtccttagaggc
acacccctttcctatgacccgctcatcagctgccccagctgcaagtacgtcacagtggca
aatgtgaccatggaggaactctacggcgcggcagtcgagccggttggcgactactgttgg
ggccgtaccgtgggtgctttatcgtttggcggtgtgctggaggcatatgtggaccgattg
acctgcaccaatgtccaaggtgccacggactttgcatgcatctggctgggccttttgtta
aacatgcagagagatgcggataatggcgcgtcaccaccagcaggcaacacggacatcagc
agtgaggaggacggagcccagctggatcggataatccggatcagcaactcagtgttcgtg
aacaactcagttacggccggcgactgcatcgcctggtcaagttcggacctgctcggcttt
ggcgcggtcgtggtgtacaccccgtacccaggcggttcttccttgaacagtgttgacctg
tttgacactgttatatccggcaacaagggtggctttggatctggccttgctttttttgcc
gatagcaacggaggcccagcggactatatgcatgtgggtgtactcaacatctcccggagc
agcttggagatgaacacggccacgaagcatggcggggccgttttcatgaacgtgtttagc
catttggaggtactgcacattacacaaggtagtaaagtcgatggcaacagtgctaatggc
cctgggggctctggtggtgcagtgcacctagccaacgagattggcaacctaacagttgag
ggcagcagtagtgtgtccgacaacacagccgctgaaagcggtggagctttctttgtcctc
tcgtatattcaacaggtctccattctgtctggcagcactgtatctgggaaccaagccacg
tctggtggtggtggtgcagtgctcgttcagaatgccggccaagcagatacccctctaaat
atcacagtccatggcagctcccatgtggatgggaatatggcagcaaaatgcggtggcgcc
ttcggtatactggcaaatgttgcaagtttccaggtggctcagggtagcagcctgaacaac
aacacggttggtgtgagtgatggcgcccaggaagagttgcgaggaggtgccgtgtatata
ggcagttgttctgctgaaggcttacaggcatcatcaggcaacatcagccgccttcttgtt
tcagacagcagctctataagctataatgtggctttataccaaggtggcgctgtgtttgta
gagcaagacgtcatcgatggcatcaccattgaaggaggcagccaagccaataacaacagt
gtcacaggaccgattgcagagggtggtggtgctattgcagtgtatggcagctgttcaagc
ttgacaatccagaacagcagcagcatttccggcaacatggcggctggcgacattacctat
gagaaaggatcccagggcggtggtgtctggatcggtggcttgttgcgaaagctggttcta
acaggaggcagccgtgtgtcttggaacaaagcatggaatgggggcagcgccattgtttcg
gggatgtcagcagaggaggagctggccgatgtcaaacatgtcatggagttgcttgaggtt
tctaacaacagctgcatctgcaataatacagctgggcaataccgatcatctctttatgga
gccatgtactttcggaacacccgagttgtgaacttcacagttacagaccgctcgtgtatg
tgcagcaacaaagtacagagtggaagtggctttggaggtgctgtctatgctgggaagggg
ttggagagtttccgaatctgccatggcagcagtgtgagtgataaccagggtggcaatggc
ggtgccatctacattcctaatgttcagctggtcgatgatgatgccaatggaacgaagctt
ttgccgcttcagaggtttgaattgtgtggcggcagccggatggacggtaacctggccggt
atatccggtggcgcaatcttcatggaggggcccgctggtgaaatcatcatatccaacagc
agtatctcccataaccaggcgcttgtcactggcggggccattcacctgacagcaatgcct
aaaaacttgtccatcagtgacagcaatctcttcaataactctgccatgtttggagaaggt
ggcttcatgcacttaatggttgtacccggcagtgaaggccaggtctcaggatattcgtcg
ggcatcagcaacagcgatacatcgcagaaacttccggatgatgggccatactatctgaac
attgcacggtccagcatttctgaaaacagtgctctcaaggatggtggggccatctcaatc
aaccttcggcactggatacgtactgtaccggatgacatgaaacggctacaactccagaag
gatcgagtgctctacctgaagattgctgattccacttgggatagtaactgggctcactac
ggtgctggtggggccctggccttcctctccctgacaccagtgttatcgactcagcagcgg
atggcctccgtcttcatgggggcccgtatcaacatcacaaacaccaccttccacacgaat
actgctggtgatgattcaacaaggctcttgtacatccaggacgtcagcccacttcgaggc
aatggtggagccctcttcatttgggcggagcccttccttttggaggacagccctagcgaa
aagaagctgcttaccaaccaaacaggttacataatgtatgacaaatcctcaggttgtgac
acgacggaagctgatttggtccctggcatccaggctttcagtaatatgacttgctggcct
gaaggcagccaagcatgtggtgtgcgcttggagggggtttctatccgggataacatggca
aaaggtggctatggtggaggctttcttcttgcccactgcgctgcaaagatcattaacagc
aattttaacaacaatggtgctgatctggatggtggtggctttgccttcatggattatgca
atccctgcatacgtatcgcagcccagctatgttccaactacgaaggacagcagcagcagc
aacaacagcaatccgagttcaccttcacgtgcttcaccgccattgaatcgtccaccccag
atttcaaggcctcctccgcctgttgccctgggtcaacctaagaatgtatcgcgtggctgc
atcacgttccctggagtgactgtgacggtgcaagctcagctgccctccctggaagcacgg
cagaacatagatatgacaaagctgccaagacagccttgggtggtcgtacagcgtacggcg
tttacacaaaactccgcaagaaatggcggcggtgtgttccttgaagccaataagacagca
gctgtcattctggactgcaccctagctgataacgcggctcaggtgcagggtggcggggct
atgctgatcggagctagcaccttcgcacaggtcacagctgtccttcgcaacacgaccttt
gaggacaatgaagctggcactgttggcgggggcctggcagtgcagctcaccaggagcagg
gcggctgtagtcctgttcaatgacacttttaagggcaactctgccactcgtggtggtgga
cttttcaattcaggtgtgaagggatcgtccttgctggcatggggctgtattctgcatgat
aatactgccaactatggtggtggagctgcgctggattatgtagttgcatccgcatccagc
agcaatttgaatacttcaccatcaccaccaccttccccaagaccaccttcaccagcaccg
gcgccaccacgcccaccacgtccacccccgccacccccacccattaacaacattccagca
tttactccggttacagcaattgtgcatttccagcaatgccggttcacagagaatcaggtt
ttgctgagtgggggaggcatttatctagctgcagctggtcagaacgtcctaacccttctg
gagcagagtgaagtcagcctcaacagtgcggcactaggtggtgggatatacttgaacgcc
accgatggttgcattatgcgggtcagtagctgcagtatcaccaacaacactgctaacctg
caaggaggtggggcgtatagtgctacaacatgcggtggccagctcatggttggaaacgga
agctactggtccgggaacacagcgggggtctatggtggcgctatcatggtcaacagtgca
gatattgttcgcgtcaacaggagcgcaaatgtgaccgatgcctcagtattattagctaat
actaccataggcgcgcaagcagggaacagcaccagcaaccaaaccctcttttcctgccaa
aaacccagcctagacatcgctaactcaaccgtggtattaaacactgcgcaacaaggtgat
ggcatttatgctgccaagctagcaattgatgttgaatatagtaagctggttgagcacgtg
cggaagtacgtttgcctttag
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