Vibrio cholerae O1 O395: VC0395_A1056
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Entry
VC0395_A1056 CDS
T00520
Name
(GenBank) putative toxin secretion transporter
KO
K12531
ATP-binding cassette, subfamily B, bacterial RtxE
Organism
vco
Vibrio cholerae O1 O395
Pathway
vco02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vco00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VC0395_A1056
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vco02000
]
VC0395_A1056
02044 Secretion system [BR:
vco02044
]
VC0395_A1056
Transporters [BR:
vco02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VC0395_A1056
Secretion system [BR:
vco02044
]
Type I secretion system
RTX toxin transporter
VC0395_A1056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
Peptidase_C39
SMC_N
AAA_22
AAA_18
AAA_21
AAA_29
MeaB
Tmemb_9
ABC_ATPase
PRK
Rad17
RsgA_GTPase
AAA_28
SbcC_Walker_B
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
ABQ21939
UniProt:
A0A0H3AKW5
LinkDB
All DBs
Position
2:complement(1101640..1103799)
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AA seq
719 aa
AA seq
DB search
MNTRFTTDAHRLAEQTLPQESPRTNWGIEAVVYAGQQFHKKSTSSQLKHALGVSYANLTD
MEMREAADYLGLKSQITKLSIQAFNTLPLPALIEYQGGWKVMIQTDDNGWTAYDPATDSL
HTLSFTSAESTAHYKVMLIADESLSVKEVKFGLSWFAPSILRQKNQLRDVFLYAIALQIF
ALVSPMLFENVIDKVLVGRSLSSLHVLALAMLALAEPAYSYLRNTVFGHLASQVNAELSG
RLYRHLVGLPLTYFKQRQTGQIIARVREMAQIRQFLTGSTLMLLLDLIFVTVFLAVMFHY
ASTLTWLVIGSLVIYFVLWLIAGPLIRKKVESEYESDANATTFLTEAVTGIETIKTTATE
HRFLEQWQRILSQQLNRSFDAQKSGLIAGQAIALVQKLTAALLLWWGVSAVLKGEITPGQ
LVAFNMLAGHVTQPVLRLAQIWQDFQHTLIALRRVGDILDEPRENSKQGLASVPELDGGI
EFSNIRFRYHQDAPEVLANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLV
DGMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFI
EGLPHGFNQPVGEKGAALSGGQRQRIALARALLVNPRILLLDEATSALDYNSEASIMSNM
DEICRGRTVISIAHRLNTIRHADNIFVLDKGQVAESGTHEELLAQQGLYAKLWTQQVGE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccgttttacaaccgacgctcataggcttgctgaacaaacgttaccacaagag
tctccaagaactaattggggtatcgaagctgtggtctacgcaggtcagcaatttcacaaa
aaatcgaccagctcgcaactgaaacacgcgctaggggtaagctacgccaatctcactgac
atggaaatgagagaggccgccgactatcttggcctgaaaagccaaataacaaagcttagt
attcaagcgttcaatacgctgccactccccgctcttatcgaatatcagggtggctggaaa
gtgatgattcaaaccgatgataacggttggacggcctacgatcctgcaaccgactctctg
cacacactctcgttcacatcggctgaatccaccgcgcattacaaagtcatgctgattgcg
gatgagtctctgagcgtcaaagaggtcaaatttggtttaagctggttcgccccttccatt
cttcgccaaaaaaaccaactgcgagatgtgtttctttacgccatcgcgctacagatattt
gcgctggttagcccgatgctgtttgaaaatgttatcgataaagtgctcgtgggacgaagc
ctatcaagcttgcatgtgctggcgctggcgatgttagcgttagctgagccagcatacagc
tatttacgcaataccgtatttggccatcttgcaagccaagtgaatgcagagctgtcaggc
cgactctatcggcacttagtcggtctgccattaacctatttcaagcagcgccaaactggg
caaatcattgcgcgagtgcgtgaaatggcgcaaatccgtcagtttctgacgggttcaact
ttgatgctattacttgatctgatttttgtgacggtttttctcgctgtcatgttccattac
gccagtacactgacttggttagtgattggctcgcttgtgatttattttgtgttgtggctg
attgcaggaccgctgatccgcaaaaaagtggaatctgaatacgagtccgacgctaatgcc
acgacgtttttgaccgaagccgttactggtattgaaaccatcaaaacgaccgcgacggag
catcgctttcttgagcagtggcaacgtattcttagccagcaactaaaccgtagctttgat
gcacaaaaatcggggctcatcgctgggcaagctatcgctctggtgcagaagctgactgcg
gcactgctgctttggtggggcgtgagcgcggtactcaaaggtgaaatcactcccggtcag
ctagtggccttcaatatgctcgcaggccatgtgactcagcccgttctgcgactggcacaa
atttggcaggattttcagcacactcttatcgcactgagaagggttggcgatattctcgat
gaaccgagagaaaacagtaaacaaggcttagcgtccgtgcccgaactcgacggtggcatt
gagtttagtaacattcgctttcgttaccaccaagatgcccctgaggtactggccaatcta
tcactcaagatcaaaccggggcaatttatcggcgttactggaccatcaggttcaggcaaa
agcacactcactcgcctgttgcaacgcttgtacgttccgcaacatggccaagtgctggtg
gatggaatggatcttgcgattgcggatcccgtgtctctgcgccgcaatatgagtgtggta
ctacaagagagcattcttttttccggaagtgtggcggacaatattcgtttatgtaaaccg
caggccagcgatgaagaaatccgtcatgccgctcaattagcaggtgcgttagcatttatt
gaaggacttccccacggctttaaccaaccggttggggaaaaaggtgcagcgctttcggga
ggtcaaaggcaacgtatcgccttagcgagagccttgctggtcaatcctagaatcttactg
ctggatgaagcgacctctgctctcgactacaattctgaagcgtcaatcatgagcaatatg
gatgaaatatgtcgtggtcgcactgtgatcagtattgcccatcgcctcaataccatccgc
catgctgacaacatctttgtcttggataaaggacaagtcgccgaaagcggtacacatgaa
gaactgcttgcccagcaagggctgtacgccaaactttggacgcaacaagtgggagaatag
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