Vescimonas coprocola: MM50RIKEN_07740
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Entry
MM50RIKEN_07740 CDS
T07634
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
vcop
Vescimonas coprocola
Pathway
vcop00470
D-Amino acid metabolism
vcop00550
Peptidoglycan biosynthesis
vcop01100
Metabolic pathways
vcop01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MM50RIKEN_07740 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MM50RIKEN_07740 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MM50RIKEN_07740 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcop01011
]
MM50RIKEN_07740 (ddlA)
Enzymes [BR:
vcop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
MM50RIKEN_07740 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vcop01011
]
Precursor biosynthesis
Amino acid ligase
MM50RIKEN_07740 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
GARS_A
RimK
ATPgrasp_ST
ATP-grasp
ATPgrasp_YheCD
TTL
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
BCK81011
UniProt:
A0A810Q6D1
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All DBs
Position
803782..804843
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AA seq
353 aa
AA seq
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MKIVVLAGGLSTERQVALTSGTGVCRALRERGHQAILVDMFLGLESYEGRLEDIFDAPDG
LCGDNRVTEEAPDLEAVRRSRKDQGPSLLGKDVLAVCAMADIVFLALHGSCGEDGRIQAT
LDLLGVPYTGSGYLGSGMAMDKSVTKRFLESEGIRTAPWRDVHYTASDIPRLVEELEVPC
AVKIVNGGSSIGVELPDTKEQLREALAKLLTYGDHVVVEKKIKGREIQIAVLGDAYLPAV
EIIPRGEYFDYVSKYQKGGAQEICPAPITEEEWHQIGEMALKLHRGLGLSVYSRSDFLLD
EEGKAWCLEINTLPGMTPTSLVPQEAAQVGLSYADLCERIVEESLKARGVQRT
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgttgtgttggccggtggactcagcacggagcgtcaggtggctctgacctcc
ggcaccggtgtgtgccgggcgctgcgggagcggggacatcaggctattctggtggatatg
ttcctggggctggagagctatgagggccggctggaggatatcttcgatgccccggacggc
ctgtgcggcgacaaccgggtcacggaggaggctccggatctggaggccgtgcgccgcagt
cggaaggatcaggggccgtccctgctgggcaaggacgtgctggcggtgtgcgccatggcg
gatatcgtgtttctggcgctccacggctcctgcggcgaggacggtcgtattcaggccacg
ctggatctgctgggagtaccctacaccggctctggctatctgggcagtggcatggccatg
gacaaatccgttaccaagcggtttttggagtctgagggtattcgcacggcaccgtggcgt
gacgtccattacacggcctccgatatcccccgtctggtggaggagttggaggtcccctgc
gccgtgaagatcgtcaacggcggcagttccatcggtgtggagctgccggataccaaggag
cagctgcgggaagccctggccaagctgctgacctacggcgaccacgtggtggtggagaag
aagatcaagggccgtgagatccagattgccgtgctgggggacgcctatctgcctgcggtg
gagatcatcccccgtggcgaatatttcgactacgtttccaaatatcagaagggcggtgct
caggagatctgccccgcccccatcacggaggaggagtggcaccagatcggtgagatggcg
ctgaagctccaccggggactgggcctgtcggtgtattcccgctccgattttttgctggat
gaggagggaaaggcgtggtgcctggagatcaacacactgccgggcatgacccccaccagt
ctggttccgcaggaggcggcgcaggtgggtttgagctatgccgacctctgtgagaggatc
gtggaggagtctctgaaggcgagaggagtgcagcggacatga
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