Vescimonas coprocola: MM50RIKEN_23010
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Entry
MM50RIKEN_23010 CDS
T07634
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vcop
Vescimonas coprocola
Pathway
vcop03030
DNA replication
vcop03430
Mismatch repair
vcop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MM50RIKEN_23010
03430 Mismatch repair
MM50RIKEN_23010
03440 Homologous recombination
MM50RIKEN_23010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcop03032
]
MM50RIKEN_23010
03400 DNA repair and recombination proteins [BR:
vcop03400
]
MM50RIKEN_23010
Enzymes [BR:
vcop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MM50RIKEN_23010
DNA replication proteins [BR:
vcop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MM50RIKEN_23010
DNA repair and recombination proteins [BR:
vcop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MM50RIKEN_23010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
AAA_5
RuvB_N
AAA_30
AAA_19
AAA_14
DnaX_C
Herpes_Helicase
DUF815
AAA_18
AAA_28
Mg_chelatase
AAA_2
AAA_assoc_2
AAA_16
TsaE
Sigma54_activ_2
nSTAND3
PIF1
Motif
Other DBs
NCBI-ProteinID:
BCK82538
UniProt:
A0A810Q2H6
LinkDB
All DBs
Position
2388045..2389997
Genome browser
AA seq
650 aa
AA seq
DB search
MYQALYRKWRPKVFSEVVGQEHITDTLRRQVAEGHTAHAYLFTGTRGTGKTTCARILAKA
VNCLSPVDGEPCGRCEACRAVDAGTTLDITELDAASNNGVDQVRALREEAVYTPAVLKKR
VYIIDEVHMLSTPAFNALLKILEEPPEHLMFILATTELHKVPATILSRCQRFSFKRILPR
DMERQLLHIAQAEKIDLTPDGAEILSRMAGGALRDALSLLDQCRVAEGQLTSRAVLDVLG
LAGSVQTQQMMRCILDRRTPDALLLLDQLYRSGKDVSALLGELSDLAREMTILKAAPEGG
SALLSGLYDTKTLTGLSENISMQRLLYLTETLQGTRAALPDSFQPRTDVELCLLRLCDES
LCGDLTALSARLDRVEELLKKGVPARRERPAAQPAAERPAAPESRTSADSESRPAAAEKR
PPAPEEVPWEEPPLPDEPAGRERVFDIPEEPQRSSAPKPTHRVPRRSAPADPAPSAPVGD
SRLWTQLLDQFKGRLPVNHRVFLNMASGTVEGDCLTVHCRNDFVRDSLNNRTVLAVLEEV
TSAAVGSPVRVMLTVGGETPSAPRPAPKPPRPAPEPAPAPEKERPPLPEEPPLPAEPSRP
PEPIAEEERPPLPEEPSAQEENAPPWEGGSKDRLEELIGPGSQLEHFKIK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaggcgctgtaccgcaagtggcggcccaaggtgttttccgaggtcgtgggacag
gagcacatcacggataccctccgccgtcaggtggccgagggccataccgcccatgcctat
ctcttcaccggcacacggggtaccggcaagaccacctgcgcccggatactggctaaggcg
gtgaactgcctgtccccggtggacggcgagccctgcggccggtgcgaggcctgtcgggcc
gtggatgccggcaccacgctggatatcacggagctggacgccgccagcaacaacggcgtg
gatcaggtccgtgcgctgcgggaggaggcggtatatactcccgccgtgctgaaaaagcgg
gtgtatatcatcgacgaggtgcatatgctctccaccccggccttcaacgccctgctgaag
atcctggaggagccgccggagcatctgatgttcattctggccaccacggagctgcacaag
gtcccggccaccattctctcccggtgccagcgcttctccttcaagcgcatcctgcctcgt
gacatggagcgccagctgctgcacatcgctcaggccgagaagatcgacctcacccctgac
ggtgcagagatcctctcccgcatggcggggggcgccctgcgggatgccctgagcctgctg
gatcagtgccgtgtggcggagggccagcttaccagccgtgccgtgctggacgtgctgggc
cttgccggcagcgtccagacccagcaaatgatgcgctgtattctggaccgccggacgccg
gatgccctgctgctgctggatcagctgtaccgcagcggcaaggacgtctccgccctgctg
ggggaactcagcgatctggcacgggagatgaccattctcaaagccgcgccggaggggggc
agcgccctgctctccgggctgtatgataccaagacactgacgggcctctccgaaaacatc
tccatgcagcggctgctgtacctgacggagacgctgcaagggacccgtgctgccctgccg
gacagcttccagccccggacggatgtggaactgtgcctgctgcggctgtgtgacgagagc
ctctgcggcgacctgacggccctcagcgcccggctggaccgggtggaggagctgctgaaa
aagggtgtccccgcccgccgggagcgccccgccgcccaaccggcggcagagcgtcccgct
gccccggagtcccgcacctcagcggattcagagtcccgccccgctgcggcggagaagcgt
cctcccgccccggaggaggtcccgtgggaggagccgcctctgcccgacgaaccggcgggc
cgggagcgtgtctttgacatcccggaggagccgcagcgctcctccgccccaaagcccact
catagagttccccgcaggtctgcccccgcagacccggccccctcggcccccgtcggcgac
agccgcctgtggacccaactgctggatcagttcaagggccgcctgccggtgaaccaccgg
gtctttctcaacatggcctccggcaccgtggagggtgactgcctcaccgtccactgccgc
aacgatttcgtccgggactccctgaataaccgcacggtgctggcggtgctggaggaggtc
acctccgccgccgtgggaagccccgtccgggtgatgctgacggtgggcggcgaaacgcca
tctgccccccgccctgccccgaagcccccccgccccgctccggaacccgctcccgcaccg
gagaaggagcgccctcccctgccggaggagccgcccctgcctgcggagccatcccgcccc
ccggagccgatcgcggaggaggaacgtccccctctgccggaggagccctcggcgcaggag
gagaacgctccaccttgggagggcggcagtaaggaccggctggaggagctgatcggcccc
ggcagccagctggagcactttaagatcaaatag
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