Vagococcus carniphilus: H9L18_05100
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Entry
H9L18_05100 CDS
T06797
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K18231
macrolide transport system ATP-binding/permease protein
Organism
vcp
Vagococcus carniphilus
Pathway
vcp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
H9L18_05100 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcp02000
]
H9L18_05100 (abc-f)
01504 Antimicrobial resistance genes [BR:
vcp01504
]
H9L18_05100 (abc-f)
Transporters [BR:
vcp02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
H9L18_05100 (abc-f)
Antimicrobial resistance genes [BR:
vcp01504
]
Gene variants
Macrolide resistance genes
Transporters
H9L18_05100 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_23
AAA_22
NB-ARC
ABC_tran_Xtn
NACHT
Dynamin_N
TsaE
AAA_30
GTP_EFTU
ATP-synt_ab
AAA_16
MMR_HSR1
AAA_33
DO-GTPase2
AAA_7
AAA_24
RsgA_GTPase
AAA_15
ABC_ATPase
FtsK_SpoIIIE
AAA_14
Roc
Pox_A32
cobW
nSTAND3
AAA_27
T2SSE
BrxC_BrxD
Exonuc_VII_L
MobB
NTPase_1
DUF16
Motif
Other DBs
NCBI-ProteinID:
QNN73966
LinkDB
All DBs
Position
1019662..1021131
Genome browser
AA seq
489 aa
AA seq
DB search
MKELVLTIEDLNVVYGTKTVLEIEKLMVYQHERIGIIGNNGEGKSTLLKAIEGRLPEGKG
SVNSQIEFSYFDQLNHTEKPMNGEVNEEILSRFSVPDYSIEKMSGGEKAKYNLAYILSEY
KEGLILDEPTTHLDQRSISYLIEELRFFYGTLLFVSHDRYFLNELATKIWEISDGKVKEY
SGNFEDYRRQKDLEVMEKKKTYENYENQKKSLEKSIEKSKQQVDKLTQNRKKNTKKQIKP
SRLSSSKQKDTVQKSIQKNVKTLEKRLSGLEVVTSEGNEKHISFPKTKFEMLHNDFPIKG
DKVTLVNENKVLVEDVDFQFEKGKKIAIVGENGSGKTTFLDAILEAKEGISVSSKAFISV
YEQLAYQLNHNESVITYLMNQTDYKEAVVRSILHKIGFTQNELTKRYNVLSGGERTRVSL
ALTMLRPSNILILDEPTNFVDLRTIEALESLIQSYPGTVLFTSHDKTFIQNTAEVVYEIS
NKKIVRINN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagtattaacaattgaagatttaaatgtagtttatggtacgaaaaccgta
ctagaaattgaaaaactgatggtttatcaacatgaaagaataggtattatcggaaataat
ggtgaagggaaatctactttattaaaagctattgagggaagattgcctgaaggaaaaggt
agtgttaactctcaaattgaattttcttattttgatcagttaaatcacacagaaaagcca
atgaatggtgaagtgaatgaagagatattaagtcgattttctgtgccagattattctatt
gaaaaaatgagcggaggagaaaaagccaaatataatctagcttatatcttatccgaatat
aaagaaggcttgattttagatgaacctacgactcacttagatcaaagaagtatttcctat
ttaatagaagaattacgatttttttatggaacactattatttgtcagtcatgatcgctat
tttttaaatgaattagcgactaagatttgggaaatatcggatggtaaagtaaaagaatat
agcggaaactttgaagactatcgtcgtcaaaaagatttagaagtgatggaaaagaaaaag
acttatgaaaattacgaaaatcagaagaaaagtttagaaaaatctatcgaaaaaagcaaa
cagcaagttgataaactgactcaaaataggaagaaaaatacaaagaaacagattaaacca
agtcgattgtcctcatcgaaacaaaaagatacggttcaaaaaagtattcaaaaaaatgtg
aaaacattagaaaaaagattatctggtttagaagtggtgacaagtgagggaaatgaaaag
catattagttttccaaaaactaaatttgagatgcttcataatgattttccaatcaaaggt
gataaagtaactctagtaaatgagaataaagtattagttgaagatgtagattttcaattt
gaaaagggtaaaaaaattgctattgttggggagaacggatcaggaaaaacaacttttctt
gacgcgattttagaagcaaaagaaggaatatccgtttcatctaaagcgttcatttcagtc
tatgagcaactagcttatcaattgaatcataatgaatcagtcattacttacttgatgaat
caaacagattataaagaagcagttgttcgaagtattctacacaaaattgggtttactcaa
aatgaattgactaaacgctacaatgttttaagtggaggagaacggacgagagtttctcta
gctttgacaatgcttaggccttctaatattttaattttagatgaaccaaccaattttgta
gacttaagaacaatagaagctttagaaagtttgatccaaagttatccaggaacagtactc
ttcacctctcacgataagacctttattcaaaatacggcagaggttgtctatgaaatttca
aataaaaaaatagttagaatcaataattaa
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