Vagococcus carniphilus: H9L18_12310
Help
Entry
H9L18_12310 CDS
T06797
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
vcp
Vagococcus carniphilus
Pathway
vcp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
H9L18_12310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcp02000
]
H9L18_12310
Transporters [BR:
vcp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
H9L18_12310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
DUF87
AAA_22
CoaE
AAA_18
AAA_17
nSTAND3
RsgA_GTPase
DEAD
AAA_21
AAA_23
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
QNN72629
LinkDB
All DBs
Position
2534435..2536183
Genome browser
AA seq
582 aa
AA seq
DB search
MTYMKQFLKRNKGLFFLTIVALAFQTIGTLAVPFLIGKLIDTGISSGNQKLVISIGIQML
IVAIIGSLAAVLGSFLSAKLAANYGYEIRKDFYQKTQELSIQKMDSFGVSSLLTRMMNDV
TNVQRALMMIFQLILPAPIICVFAIVMTFINSPTLAIIPLISIVIYLVAVFYLLKKGLPL
SSSIQQKLDAMVTKLREFFNGINMIRAFDNQETEESKTNHRFKDYADSMIAVNKIFSFLT
PVAYLIMGLVFSLIIWVGSLLVGQGQLQIGTVTAIIEYSMQTLGYLIVAAMVLVTLPRSI
ASLKRIDKVLETPSEFVAATNSRNTSVTDDVLVRFDDVTFSYNGAEPILENISFDILKGK
TTAIVGGTGSGKSTVAKLLLNLSNINSGDILVHNRSLSNWKQADLRQIISYTPQKAFLFS
GSIESNLLMGNSHASKKDMDRAIKTAQADSFIFNQKEGYQTAVSQGGSNFSGGQKQRISI
ARALINPADLYVFDDSFSALDYQTDAKLRKALKTEMSEQTFLIIAQRLSTIQEADQIIVL
DEGKIVGKGTHEVLLSTNKIYQEFAISQGIQLKGEDKNDSND
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacttatatgaaacaatttctaaaaagaaataaaggattattttttttaacaattgtt
gccttagcatttcaaacgataggaacactagctgtaccgtttcttattggaaaattaatt
gacacaggcattagttctggaaatcaaaaacttgtcatttcaattggtattcaaatgcta
attgtcgctattattggaagtcttgctgccgttttaggaagcttcttgtctgctaaactg
gctgctaattatggttatgaaatcagaaaagatttctatcaaaaaacacaagaattatcc
attcaaaaaatggattcttttggtgtttcaagcctgttaacacgaatgatgaatgatgta
actaatgttcagcgggcactaatgatgattttccaattaattttaccagcaccaatcatt
tgtgtgttcgccattgttatgacttttatcaactcgccaactttagctatcattccattg
atttctatcgttatttatttagtggccgttttttatctattgaaaaaagggttaccttta
tctagtagtattcaacaaaaattagatgcaatggttacaaaattaagagaattttttaat
ggtattaatatgattcgagcatttgataatcaagaaacagaagaatctaaaaccaatcat
cgctttaaagattatgcagatagtatgattgctgttaacaaaattttctcttttctaaca
ccagttgcttatctcatcatggggcttgttttttctttaattatttgggtaggtagcctt
cttgttggacaaggtcaattacaaataggaactgtcacagctattattgaatattctatg
caaacacttggctacttaattgttgctgcaatggttttagtgacacttccacgttcaatc
gcttcattgaaacggattgataaagtactagagacaccatcagaattcgtagcagcaact
aattcaagaaacacttctgtcacagatgatgttttagtcagatttgatgatgttactttt
tcttataatggcgctgagcccattttagaaaatattagctttgatatcttaaaaggaaaa
acaaccgccattgttggaggtacgggttctggaaaaagtactgtcgctaaactacttctt
aacttatctaacattaatagcggagatatcttagttcacaatcgctctttatctaattgg
aagcaagcagacttacgacaaataattagttacacacctcaaaaagcttttctatttagt
ggttccatagaaagtaatctcttaatgggaaattctcacgcttccaaaaaagatatggat
cgtgctatcaaaactgctcaagcagattcttttatttttaatcaaaaagaaggttatcaa
acggctgtttcacaaggtggttctaatttttcaggtggacaaaaacaacgtattagtatt
gccagagcattgattaacccagctgatttgtatgtatttgatgatagtttttctgcttta
gactatcaaacagacgctaaattaagaaaggctttaaaaacagaaatgagtgaacaaacc
tttttaatcatcgctcagcgtctaagtaccattcaagaagcagaccaaattattgtcctt
gatgaaggtaaaattgttggtaaaggaacccatgaagttcttctttcaaccaataaaatc
tatcaagaatttgctatttctcaaggaatccaattgaaaggagaagataaaaatgactca
aacgactaa
DBGET
integrated database retrieval system
