Vespa crabro (European hornet): 124421935
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Entry
124421935 CDS
T09462
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124421935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcrb03041
]
124421935
Enzymes [BR:
vcrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124421935
Spliceosome [BR:
vcrb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
124421935
Complex B
124421935
Complex C
U2 SnRNP specific factors
124421935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
MscL
Motif
Other DBs
NCBI-GeneID:
124421935
NCBI-ProteinID:
XP_046813625
EnsemblRapid:
ENSVCRG00010007504
LinkDB
All DBs
Position
2:13698899..13702647
Genome browser
AA seq
776 aa
AA seq
DB search
MSYHRGGGNKPKGFGFPGFQMTGTKRSGSNIPPPPPNSVLSKQGYHTMNSITENALSACW
GMPKKRSKTEEEYFEDDDDPPTSSLEYIPAPGSPTYDLMKKSTPKEDSDSEEDPLDAFMA
GIDAEVKKNNYEAQLAEEDRKEDKSKGFRADIDGEDDEESYYRYMEENPTAGLQQEESDQ
EIEYDEDGNPIAPPKKKEIDPLPAIDHNEIEYESFEKNFYNVHEEIANLSKQQIDDLRKT
LGIKVSGPSPPNPVTSFGHFGFDDALIKAIRKNEYTQPTPIQAQAVPAALSGRDIIGIAK
TGSGKTAAFIWPMLVHIMDQRELKTGDGPIGLILAPTRELSQQIYQEAKKFGKVYNIQVC
CCYGGGSKWEQSKALEAGAEIVVATPGRMIDLVKIKATNLTRVTFLVLDEADRMFDMGFE
PQVRSICNHVRPDRQTLLFSATFKKKVEKLARDVLTDPVRIVQGDVGEANTDVTQHVIMF
HNNPSGKWSWLLHNLVEFLSTGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIER
NKVITAFKKKDVSTLVATDVAARGLDIPHIKTVVNYDVARDIDTHTHRIGRTGRAGEKGT
AYTLVTEKDKEFAGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSLNVGGAG
LGFRERPDTSTNTTSGTSQGSKDISEVVKKLERHGPGSDRLSAMKAAFRSQYNSQFRASS
DHTWEQTITPPSVIMPPPPPVPPKPSIDRPKDNQTSNSSESDNKMERKRLRKSRWE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaccgtggtggtggtaataaacccaagggttttggcttccctggttttcaa
atgacaggaaccaaacgaagtggttccaatatacctcctcctccaccaaattcagtatta
agtaaacagggatatcacactatgaattctattactgaaaatgctttatctgcttgttgg
ggtatgccaaagaaacgtagcaagacagaagaagaatattttgaagatgatgatgatcct
cctacatcctccttggaatatatacctgcacctggatcaccaacgtatgacttaatgaaa
aagtcaacaccgaaagaagacagcgatagcgaagaagatcctttagatgcttttatggca
ggtattgatgcagaagttaaaaaaaacaattatgaagctcagctagcagaagaagatcgt
aaagaagacaaatctaaaggatttagagcagatatagatggggaggatgatgaagagagc
tattataggtacatggaagaaaatcctactgctggattacaacaagaagagtccgatcag
gagatcgaatatgacgaagatggaaatcctatagcacctcccaagaagaaagagattgat
ccattaccagcaattgatcataatgaaatagaatatgagtcttttgaaaaaaatttttat
aatgtacatgaagaaattgcaaatttaagtaagcaacaaattgatgatctaagaaagact
ttgggtataaaagtatcaggaccttcgccaccgaaccctgtcactagttttggacatttt
ggatttgacgatgctctaataaaagccattcgaaagaatgagtatacacaacccacacca
attcaagctcaagctgtccctgctgctttaagtgggcgagatattataggcattgcaaaa
actggtagtggaaaaacagcagcctttatatggccaatgttagttcatatcatggaccag
cgagaactaaaaaccggagatggtcctattggtcttattttggcaccaactagagaatta
tctcaacagatttatcaagaagcaaagaagtttggtaaagtgtataacatacaagtttgc
tgttgttacggaggcggtagtaaatgggaacaaagtaaagctttagaagctggtgctgaa
atagttgttgccactcctggtagaatgattgatttggttaaaataaaagcaacaaattta
acaagagtcacatttttagtattagatgaagctgatcgaatgtttgatatgggatttgag
cctcaagtacggtcgatatgtaatcatgttagaccagacagacaaacactacttttcagc
gccacatttaagaagaaagttgagaaacttgctagagatgttttaacagatccagtaagg
atagttcagggagatgttggagaagctaatacagatgtgacacaacatgttataatgttt
cataataatccttcagggaaatggtcttggttgttacacaatcttgtagagtttctaagt
actggaagtttattaatctttgtgaccaaaaagttgaatgcagaggagctcgccaataat
ctcaagttaaaagaatttgatgttctacttttgcatggtgatatggaccaaatagagaga
aataaagttatcacagcgtttaaaaaaaaggatgtcagcaccttagtagctactgatgta
gctgcacgtggtttggacattccacatataaagacagtggtgaattatgacgtagcacgt
gatattgatacgcatactcatagaataggtagaacaggtcgagcaggagaaaagggtact
gcatatactcttgttacggaaaaagataaagaatttgctggtcatttagtaagaaatctc
gaaggtgcaaatcaggaagttcctaaaagcttaatggatttagccatgcaaagtgcttgg
tttagaaagtctagatttaaaggtggaaaaggtaaaagtttgaatgttggtggtgctgga
cttggtttcagagaaagacctgatacttcaacgaatacgactagcggcacttcgcaagga
tccaaagatataagtgaagttgttaaaaaattagaaagacacggtccaggcagtgatcgt
ctttctgctatgaaagctgcttttcgaagccaatataattcacaattccgagcatcgtcg
gatcatacgtgggaacaaactattacaccaccttcagttataatgcctccaccacctcca
gtgccgccaaaacctagtatagatcgacctaaggacaaccaaacctcaaattcttctgaa
tcagacaacaaaatggaacgaaaaagactacgaaaaagtcgttgggaatga
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