Vibrio cholerae O1 El Tor MS6: MS6_1556
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Entry
MS6_1556 CDS
T03666
Name
(GenBank) sialidase
KO
K23550
sialidase [EC:
3.2.1.18
]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs00511
Other glycan degradation
vcs00600
Sphingolipid metabolism
vcs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
MS6_1556
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
MS6_1556
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
vcs02042
]
MS6_1556
Enzymes [BR:
vcs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
MS6_1556
Bacterial toxins [BR:
vcs02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
MS6_1556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sial-lect-inser
BNR_2
BNR_3
BNR
Motif
Other DBs
NCBI-ProteinID:
BAP03211
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All DBs
Position
1:1788267..1790612
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AA seq
781 aa
AA seq
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MRFKNVKKTALMLAMFGMATSSNAALFDYNATGDTEFDSPAKQGWMQDNTNNGSGVLTNA
DGMPAWLVQGIGGRAQWTYSLSTNQHAQASSFGWRMTTEMKVLSGGMITNYYANGTQRVL
PIISLDSSGNLVVEFEGQTGRTVLATGTAATEYHKFELVFLPGSNPSASFYFDGKLIRDN
IQPTASKQNMIVWGNGSSNTDGVAAYRDIKFEIQGDVIFRGPDRIPSIVASSVTPGVVTA
FAEKRVGGGDPGALSNTNDIITRTSRDGGITWDTELNLTEQINVSDEFDFSDPRPIYDPS
SNTVLVSYARWPTDAAQNGDRIKPWMPNGIFYSVYDVASGNWQAPIDVTDQVKERSFQIA
GWGGSELYRRNTSLNSQQDWQSNAKIRIVDGAANQIQVADGSRKYVVTLSIDESGGLVAN
LNGVSAPIILQSEHAKVHSFHDYELQYSALNHTTTLFVDGQQITTWAGEVSQENNIQFGN
ADAQIDGRLHVQKIVLTQQGHNLVEFDAFYLAQQTPEVEKDLEKLGWTKIKTGNTMSLYG
NASVNPGPGHGITLTRQQNISGSQNGRLIYPAIVLDRFFLNVMSIYSDDGGSNWQTGSTL
PIPFRWKSSSILETLEPSEADMVELQNGDLLLTARLDFNQIVNGVNYSPRQQFLSKDGGI
TWSLLEANNANVFSNISTGTVDASITRFEQSDGSHFLLFTNPQGNPAGTNGRQNLGLWFS
FDEGVTWKGPIQLVNGASAYSDIYQLDSENAIVIVETDNSNMRILRMPITLLKQKLTLSQ
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcaaaaacgtaaagaaaaccgctttaatgcttgcaatgttcggtatggcgaca
agctcaaacgccgcactttttgactataacgcaacgggtgacactgagtttgacagtcca
gccaaacagggatggatgcaagacaacacgaataatggcagcggcgttttaaccaatgca
gatggaatgcccgcttggttggtgcaaggtattggagggagagctcaatggacatattct
ctctctactaatcaacatgcccaagcatcaagtttcggttggcgaatgacgacagaaatg
aaagtgctcagtggtggaatgatcacaaactactacgccaacggcactcagcgtgtctta
cccatcatttcattagatagcagtggtaacttagttgttgagtttgaagggcaaactgga
cgcaccgttttggcaaccggcacagcagcaacggaatatcataaatttgaattggtattc
cttcctggaagtaacccatccgctagcttttacttcgatggcaaactcattcgtgacaac
atccagccgactgcatcaaaacaaaatatgatcgtatgggggaatggctcatcaaatacg
gatggtgtcgccgcttatcgtgatattaagtttgaaattcaaggcgacgtcatcttcaga
ggcccagaccgtataccgtccattgtagcaagtagcgtaacaccaggggtggtaaccgca
tttgcagagaaacgtgtggggggaggagatcccggtgctctgagtaataccaatgacata
atcactcgtacctcacgagatggcggtataacttgggataccgagctcaacctcactgag
caaatcaatgtcagtgatgagtttgatttctccgatcctcggcctatctatgatccttcc
tccaatacggttcttgtctcttatgctcgatggccgaccgatgccgctcaaaacggagat
cgaataaaaccatggatgccaaacggtattttttacagcgtctatgatgttgcatcaggg
aactggcaagcgcctatcgatgttaccgatcaggtgaaagaacgcagtttccaaatcgct
ggttggggtggttcagagctgtatcgccgaaataccagcctaaatagccagcaagactgg
caatcaaacgctaagatccgaattgttgatggtgcagcgaaccagatacaagttgccgat
ggtagccgaaaatatgttgtcacactgagtattgatgaatcaggtggtctagtcgctaat
ctaaacggtgttagtgctccgattatcctgcaatctgaacacgcaaaggtacactctttc
catgactacgaacttcaatattcggcgttaaaccacaccacaacgttattcgtggatggt
cagcaaatcacaacttgggctggcgaagtatcgcaggagaacaacattcagtttggtaat
gcggatgcccaaattgacggcagactgcatgtgcaaaaaattgttctcacacagcaaggc
cataacctcgtggagtttgatgctttctatttagcacagcaaacccctgaagtagagaaa
gaccttgaaaagcttggttggacaaaaattaaaacgggcaacaccatgagtttgtatgga
aatgccagtgtcaacccaggaccgggtcatggcatcacccttactcgacaacaaaatatc
agtggcagccaaaacggccgcttgatctacccagcgattgtgcttgatcgtttcttcttg
aacgtcatgtctatttacagtgatgatggcggttcaaactggcaaaccggttcaacactc
cctatcccctttcgctggaagagttcgagtatcctagaaactctcgaacctagtgaagct
gatatggttgaactccaaaacggtgatctactccttactgcacgccttgattttaaccaa
atcgttaatggtgtgaactatagcccacgccagcaatttttgagtaaagatggtggaatc
acgtggagcctacttgaggctaacaacgctaacgtctttagcaatatcagtactggtacc
gttgatgcttctattactcggttcgagcaaagtgacggtagccatttcttactctttact
aacccacaaggaaaccctgcggggacaaatggcaggcaaaatctaggcttatggtttagc
ttcgatgaaggggtgacatggaaaggaccaattcaacttgttaatggtgcatcggcatat
tctgatatttatcaattggattcggaaaatgcgattgtcattgttgaaacggataattca
aatatgcgaattcttcgtatgcctatcacattgctaaaacagaagctgaccttatcgcaa
aactaa
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