Vibrio cholerae O1 El Tor MS6: MS6_A0704
Help
Entry
MS6_A0704 CDS
T03666
Name
(GenBank) sucrose operon repressor ScrR, LacI family
KO
K03484
LacI family transcriptional regulator, sucrose operon repressor
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcs03000
]
MS6_A0704
Transcription factors [BR:
vcs03000
]
Prokaryotic type
Helix-turn-helix
LacI family
MS6_A0704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_23
HTH_3
HTH_Tnp_ISL3
HTH_31
HTH_IclR
HTH_38
Sigma54_DBD
MarR_2
HTH_26
Motif
Other DBs
NCBI-ProteinID:
BAP04963
LinkDB
All DBs
Position
2:600212..601204
Genome browser
AA seq
330 aa
AA seq
DB search
MASLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTN
LIGVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIV
FYATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQIG
FIGVQSDDIAVDVLRSQGLQQALGFHQQTLLFHARGNFSIESGYQMAKQAYLDYPQLDGL
FCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGENAAK
MLLERIAGRGQEMSKVVLTFQNIQRETCPV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggccagtttgcatgatgtcgcccgtttagcgggtgtctctaagtccaccgtctcacgc
gtcatcaatgatgaatatggcgttaaagagtctacaaaaatcaaagtgttaaaggcagtt
gagcagtgtggctatatggtcaatcaagttgctaaagacctcaaatcacaaaaaaccaac
ttaattggcgtgattgtgccgcgcgtctcctctcacgcaacagcacaaggcgtggatgga
cttaccgctatttttgagcaagcaggtaaacatgttttactggccaacactcatcaagtc
catgcaaaggaaattgaatatattcagatatttaatcaaaagcgggtggaaggtattgtg
ttttatgccactcaccttgatcagccgctggttcatgcgattcaacactcggcggtacct
gttgttttggttggccaagatggctctttgtataacattcccagtattgtgcatgacgat
caccgtgtcggcttcgaagcaggacaacgcttagtcaaagcaggctgcaaacagatcggt
ttcattggggtacaaagtgatgacattgcggttgatgtgctgcgttcacaaggcttgcag
caagctctggggttccatcaacaaacgttgctgtttcatgcgcgcggtaatttctcaata
gaatcgggctaccaaatggcaaaacaagcctaccttgactatccacagctcgatggcctt
ttctgtgccaccgacaggctagcggttggcgccattaaagccttgcaagagcttggggtt
cacgttggacagcaagtcaaactgctcggtgtcggtaatgatgagttggcttatgtcagc
aatcccccactctccacttttaactatgcttttgataaggcaggagaaaacgctgcgaaa
atgctattagaacgcatcgccggacgtggacaagagatgagcaaagtggtactgaccttc
caaaacattcaacgtgagacttgcccagtctaa
DBGET
integrated database retrieval system
