Vibrio cholerae O1 El Tor MS6: MS6_A0898
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Entry
MS6_A0898 CDS
T03666
Name
(GenBank) periplasmic alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs00500
Starch and sucrose metabolism
vcs01100
Metabolic pathways
vcs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
MS6_A0898
Enzymes [BR:
vcs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
MS6_A0898
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
BAP05157
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Position
2:823191..825263
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AA seq
690 aa
AA seq
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MKLNALTLSLLSALALPALASSASTANLTVATTTNSRDFPLQADEPLVIPLTKGDYTLTI
SGIGGDCPPAPEQEIKFNTPIALNCHVPTQLPLSIRFTGDYAFQWQAQNNTLTFVRQTTK
AAKTEFRRPIPNVSCEVYQGGEVTLDLASSFADGTELQDAMTGQVVTVDQGKVRLTPSAN
SGGLVLLEPKQTAKAEPKQPFTYRNANIYFVMVDRFYNADPSNDGSYGRHKDGQEEIGTF
HGGDLKGVIAKLDHIQSLGTDAIWLSPIVEQVHGFVGGGEKGSFPFYAYHGYWTRDFTKI
DANFGKDEDLQTLVREAHRRGIKILMDAVINHAGYATLADLQQDAVLVVNAPMLPERWND
WKPSADENWHSFHQAIDYQSKNWQQWWGPDWVRAGLPGYPAPGSSDITMNLAGLPDFRTE
SPQAVTPPQWLLNNPGTRVVSKPNYTVADYLIEWQSDWVRRFGIDGFRIDTVKHVEGEVW
QRLKQRATENLAAWRKDNNQSGEPFWMMGEVWGHGAYRSPYFDDGFDALINFDIQKRMDN
GAACLSQMAMVYRDYAQTLAKYPDFNPVSYMSSHDTELFFGRFKSLDMQRNAANALLLTP
GAIQVYYGDEVAREAGPYADDFHQGTRSDMPWEWNAERQALLKHWQTLGQFRQRHPAIGA
GDHREIAQSNAYVFTRTLGEDKVVVAFVGR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaacgccttgaccctatcgctgctctcagctctagctttgccagcactggcc
tcatcggcttcgaccgcgaatttaacggtagcaaccaccaccaacagccgtgattttcca
ctgcaagccgatgaaccactggtgatcccgctcactaagggcgactacaccttgaccatt
agcgggattggcggtgattgcccacctgcccccgaacaagagatcaaattcaatacgccc
atcgctctcaattgccatgtcccgactcagttacctttgagtatccgttttaccggggat
tacgcatttcagtggcaagcgcaaaacaatactctcaccttcgtgcgtcaaaccactaag
gcagccaaaactgagtttcgtcgtccgatcccaaacgtcagttgcgaagtgtatcaaggc
ggtgaagtgactttagatctggcgagcagctttgccgatggaaccgagttgcaagatgct
atgactgggcaagtagtgactgttgaccaaggcaaagtgcgcttaaccccttccgctaac
agcggcggcttggtgttgttggaacccaaacagacagcaaaagccgagcccaaacagccc
tttacctatcgaaatgccaatatttattttgtgatggttgatcgcttctacaacgctgac
ccaagcaatgatggcagttatggtcgtcacaaagatggccaagaggagatcggaacattt
catggcggcgatctcaagggtgtgattgcaaaacttgaccatatccaaagcttaggcacg
gatgctatctggctctctccgattgtcgaacaggtacatgggtttgtcggcggtggcgag
aaaggatcattcccgttttatgcctatcacggctattggacccgcgatttcaccaagatc
gatgccaactttgggaaagatgaggatttacaaaccttagtgcgtgaggcgcatcgtcgc
ggcattaaaattttgatggatgcggtgatcaatcatgcaggttacgcgacactcgccgat
ttacagcaagatgcagtactagtggtgaacgcacctatgctgcctgaacgttggaatgac
tggaaacccagcgccgacgaaaactggcacagcttccatcaagccattgattaccaaagc
aagaattggcaacagtggtgggggccagactgggtacgcgcaggcttaccgggctatcct
gcgccgggcagcagtgacatcacgatgaatctcgccggtttaccggattttcgcactgaa
tccccccaagccgttaccccgccgcagtggctactcaacaatcccggcacacgagtggtg
agcaaacccaattacactgtcgctgactatttaattgaatggcaaagcgattgggtacgc
cgctttgggatcgacggttttcgcatcgacaccgtcaaacatgtggaaggggaagtgtgg
caacgcttaaaacagcgcgcgacggaaaaccttgcagcgtggcgtaaagacaataatcaa
agcggtgagccgttttggatgatgggcgaagtgtgggggcacggtgcctatcgcagccct
tactttgatgatggctttgatgcactgattaactttgatattcaaaaacgtatggataac
ggcgcagcctgtttgagccagatggcgatggtgtatcgcgattacgcgcaaaccctcgcc
aaatatcccgactttaaccccgtcagttatatgtcctcgcacgatactgagctgtttttc
ggacgctttaaatcactggatatgcagcgtaacgccgccaatgccctgctactgacaccg
ggtgcgatccaagtgtattacggcgatgaagtcgcccgcgaagcgggaccgtacgcagac
gatttccatcaaggcactcgctctgatatgccttgggaatggaatgccgaacgccaagca
ctgctcaagcattggcaaaccttaggtcaattccgtcaacgtcaccctgcgataggagcg
ggagatcatcgcgaaatcgcccaatccaacgcttatgttttcactcgcacattgggtgaa
gataaggtggtcgtggcgttcgttggccgctaa
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