Vibrio coralliilyticus OCN014: JV59_01800
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Entry
JV59_01800 CDS
T03497
Name
(GenBank) c-di-GMP phosphodiesterase
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vct
Vibrio coralliilyticus OCN014
Pathway
vct05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
JV59_01800
Enzymes [BR:
vct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
JV59_01800
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GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_8
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
AIS53913
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Position
1:complement(370416..372455)
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AA seq
679 aa
AA seq
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MLSQQLQHWFTKITANSPFFFAILDSQHNYAMVNGRYCDIAGLSNQELVGMSDTQTLGKH
FYNQLKPYYERAFNGESLEAEITLNEIDLETSLHFSLAPIEIDNKIEYVAFHAVDTSEKH
ILVRSLEESESKFSTLTTLLPDGLLLVEEDCIISANPAAVRLLGFEDNSDLLGEELSRLF
VDEKTKTVFSKSLISSLAKAPLTCLTGPRCGFERRVQLHADDAMVLGSNTQLVLIQDADE
TPKHLNNKPLEDAHIDSLTGLYNRFGFTKRLEQFIHNETPLLLLYLDIDNFKNINDSLGH
HIGDKVIKEVSSRLKRLLPQHAVVGHLGGDEFGLILPEPENNRMAEILAERIISLINQPF
DLHHFSKRLACSIGSVTYPGDGNDARILLQNADTAMYEAKDRGRNRLIKFNDQMNKEARM
RLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALIRWKHPVEGYISPGAFIPVAER
AGLIEHLGRVVMREVFSTVKRWKLQGILPGRVAINLSPEQFGNPKLIDYMEKLLRTTELD
PNCITFELTESAVMSDSEHTLQMLNAIKKLGFALSIDDFGTGYSSLSYLARFPIDELKID
RAFINDIDTLPKQVTVIENIINLGKSLNLTVVAEGVETQQQATLLSNLNCNSIQGFHFYR
PQPKQEVEELFAQHRRHKN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgcaacaactacagcattggttcacgaagataacggcaaacagcccgtttttt
ttcgccattttggatagccagcataactatgccatggttaatggtcgctattgcgatatc
gccggcctatccaatcaagaactggtcggtatgagcgatacgcaaaccttaggtaagcat
ttctataaccaactcaaaccctactatgagcgtgccttcaacggtgaatctctcgaagca
gaaatcacactgaacgaaattgacctcgaaaccagtctgcatttcagcttagctcccatc
gaaatcgacaataaaattgaatacgttgcctttcatgcggtcgacacatcagaaaaacat
attctggttcgttctctagaagagtcagaaagtaaattctcaacgctcaccactttgttg
cctgatggcctactactggtcgaagaggattgcatcatttcagccaaccctgcggcagta
cgtttactcggttttgaagataacagtgatttgttaggtgaagaactttctcgactattt
gtcgatgagaaaaccaaaacggttttcagtaaatccctcatcagttcactggcgaaagcg
cccctgacctgtctaacagggccaaggtgtggtttcgaacgccgtgttcagctccacgct
gatgacgcgatggtactaggcagcaatactcaattggtgctgattcaagatgccgacgag
acaccaaaacacctaaataacaagccgttagaggatgcacacattgattctttaactggc
ctctacaatcgttttggttttaccaaacgtcttgagcagttcattcataatgaaacacca
ctattactgctctacctcgatatcgataatttcaagaacatcaacgactctttaggtcac
catattggtgataaagtgattaaagaagtgtcatctcgtcttaagcgtcttttaccgcaa
catgcggtagtagggcatttaggaggcgatgaatttggcctgatattaccggagccagaa
aacaatcgaatggcggagattcttgctgagcgcatcatctcactcattaaccagccattt
gatctgcaccatttcagcaaacgcttagcgtgctctatcggcagtgtgacgtatccagga
gatggcaacgacgcacgtattctgctgcaaaacgccgacaccgcgatgtacgaagccaaa
gaccgaggccgtaatcgtctgattaagttcaatgatcagatgaacaaagaagcgcgtatg
cgtttatggctggaaattgagctgcaaaaagctttacaacagaatggcttggaagtctgg
taccagcctaaggtcaacgctcgtgatttcagcatcaatggcgccgaagcccttatccgc
tggaagcaccctgtggaaggttacattagcccgggcgcttttatccctgtcgccgaacga
gcaggcttaattgaacacctcggtcgagtcgttatgcgagaagtattcagcacggttaaa
cgctggaaacttcaaggtattctgccgggtcgtgtcgcaatcaacctttcgccagaacaa
tttggcaatccaaaactgatcgattatatggagaagctactgcgtaccacagagcttgat
cctaactgcattacatttgaactgaccgaaagtgccgtaatgagcgacagtgaacacacg
ctgcaaatgctcaacgccattaaaaaacttggctttgctttatcgattgacgactttggt
accggttattcatcactttcttacctcgcccgcttcccgattgatgagcttaagattgac
cgcgcgttcatcaatgacatcgatacgctaccgaagcaggtgacagtaatcgaaaacatc
attaatctgggtaaatcgcttaacctgacggtggtcgcagaaggagtcgaaacccaacaa
caagcgactctgctctctaacctcaattgtaattcgattcagggcttccatttctatcgc
ccgcaaccaaagcaagaagtcgaagagctatttgctcagcatcgtcgccacaaaaactga
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