Verticillium dahliae: VDAG_00839
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Entry
VDAG_00839 CDS
T03450
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
vda
Verticillium dahliae
Pathway
vda03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VDAG_00839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vda03021
]
VDAG_00839
03036 Chromosome and associated proteins [BR:
vda03036
]
VDAG_00839
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
VDAG_00839
Coactivators
SAGA/TFTC/STAGA complex
VDAG_00839
Chromosome and associated proteins [BR:
vda03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
VDAG_00839
STAGA complex
VDAG_00839
TFTC complex
VDAG_00839
SAGA complex
VDAG_00839
SLIK complex
VDAG_00839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
SCP2_2
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
20702302
NCBI-ProteinID:
XP_009648020
UniProt:
G2WSQ8
LinkDB
All DBs
Position
1
AA seq
751 aa
AA seq
DB search
MNTQGQPAPQGQPQPNAQQGAAGHPAAANNQRSTMYRPEMMRNLPVLNDEEKLKYERGLR
SLWNTMESHGEETSDHQDAKKKIQDFTKMLMGKLQARRLQQMQQAQKQQAQQQGQAGQQT
QRSTQPAASASPAPPAPAETPATQNTAAVAPDAPDAPKANPAASLPANASPAPAANAAAS
APPQAPPQQAQQPQQQVQQQQPQKQAPQQQQQQPQQQQQQQSQPPNVPEHILNHIRSMTF
NPPPQIVEKGPEMAAKWSADIKQRYVRSLMQMEHMGNTLRKLNAAVKDRQDKGNPLGPEE
QKQIQIRKDHSQKVFQEAQMFVQNFRKTQEISKANPNAQNAAAAARPAQQNNPNAPGAAN
VAQAVPQASTPQPVSGTQQIAQPAAAPAVVEAAKMQQMNAAGRASPVANGVTTRQQQSQL
PQQPQGQQALAANSQPAPQAQPATTAPPPQQNQHIQPPPVNTAVASVAGTAGQPQSAGTP
TQAAARIQTPQTGAAGVSTQALSHSAAVSRANQRVNSQPVAATPVQPSAGTPSSAGPISQ
GVMGSGAIGNSQQGHPQPHPGQPTQQTQTLQSKLPIPKQLPEKATQVPQPVNMVNNAGAG
RPTYTGGTGIAGGVMGHPALGKIPAFSHEAEGDRVLSKKKLDELVRQVCGGTAEGQEGNL
LSPEVEENVLTLADSFVDNVLHAACRNAKERGSKVLEIRDIQLVLERKYNIRVPGYSSDD
LRTVRKVQPAPAWITKMSAIQAAKVTSGKGE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccagggccagcctgcgccgcagggccagccccagcccaacgcgcagcaaggc
gccgctggacatcctgctgccgcgaacaaccagcgctcaacaatgtaccgaccggagatg
atgcgcaacctgcccgtcctcaatgacgaagagaagctcaaatatgaacgtggtctgagg
tcattgtggaacacgatggaatcacacggagaggaaacatcagaccaccaggacgcaaag
aagaagatccaggacttcaccaagatgctcatgggaaagctccaggcccgcaggcttcaa
cagatgcagcaagcccagaagcagcaagcccagcagcaaggtcaggctggacaacagacc
cagcgcagcacgcaaccggcagcaagcgcatcgcccgcaccacctgctcccgcagagacg
ccagccacgcaaaacacggcagcagtagctcctgatgcccctgatgcgccaaaggcgaac
ccggcagcctctcttccggcgaatgccagtccagcaccggccgcaaacgcggccgcttca
gctcctccccaggctcctcctcagcaggctcagcaacctcagcagcaagttcagcagcag
caacctcaaaagcaggctcctcagcagcagcagcagcagcctcaacagcagcagcagcaa
cagtcgcagccacccaatgttccagagcatattttgaaccatattcggtcaatgaccttc
aaccctccgccacagattgttgaaaagggcccagagatggccgcgaagtggagcgctgac
ataaagcagcgctacgtgcgttcgttgatgcagatggagcatatgggaaacaccctgcga
aagctgaatgctgccgtcaaggataggcaggacaaggggaatcctttgggtccagaggaa
cagaaacagattcaaattcgcaaagaccacagccagaaagtcttccaagaggcccagatg
tttgttcaaaacttcaggaagacgcaggagatcagcaaagccaaccccaatgcacaaaac
gcagctgcagcggctcgtcctgcgcagcagaacaatcccaatgcacctggggctgcaaat
gttgcacaggctgtccctcaagcaagcacccctcagcctgtgtcaggcacacagcagatt
gcacagccagcagcggccccagcagttgtcgaggcagcaaagatgcagcagatgaatgcc
gcgggccgtgcctcaccagttgccaacggggtgacgacacgacaacaacaatctcaactg
ccccagcagcctcagggccagcaggcacttgccgcaaactcacaacctgcacctcaagcc
cagcccgctacgactgccccgccgccgcagcagaaccaacacattcaaccacctccggtc
aacaccgctgttgcttccgttgctggcactgctggccaaccacagtctgcaggcacaccc
acgcaagccgcggcgcgcattcagacacctcagacgggagcggctggagtgagcactcag
gcacttagtcactctgctgccgtttctcgcgcgaaccagagagtcaactctcaacctgtc
gcggccacgcccgtccaacctagtgcaggcacaccttcatcggcaggacccattagtcaa
ggtgttatgggctctggcgccattggtaactctcagcaaggacatcctcagcctcaccct
ggtcaacccacacagcagacgcaaacgctgcaatcaaagcttcccatacccaagcaactg
cccgaaaaagcgacccaggtcccgcagccggtcaacatggtcaacaacgccggtgccggc
cgtcccacatacaccggcggcactggcatcgccggtggtgtcatgggacaccctgccctc
ggaaagattccagccttctcgcacgaggccgagggagatcgcgttctcagcaagaagaaa
cttgacgagctcgtccgccaggtctgtggcgggacagccgagggccaggagggcaatctc
ctcagtcctgaggtggaggagaacgtcttgaccttggcagacagcttcgtggataacgtc
ttgcacgccgcctgccggaacgccaaggaacgcggctccaaggtgctcgagatccgcgac
attcaacttgttctcgagcgcaagtacaacattcgggttcccggctactcttccgacgac
ctgcgcactgttcgcaaggtgcagccggcgcccgcctggatcaccaagatgagtgcgatc
caggctgccaaggttacttcgggcaagggcgagtag
DBGET
integrated database retrieval system
