Verticillium dahliae: VDAG_03260 Help Entry VDAG_03260        CDS       T03450                                  Name (RefSeq) SKG3 protein   KO K12609   CCR4-NOT transcriptional complex subunit CAF120 Organism vda  Verticillium dahliae Pathway vda03018   RNA degradation Brite KEGG Orthology (KO) [BR:vda00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     VDAG_03260  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vda03019]     VDAG_03260 Messenger RNA biogenesis [BR:vda03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      VDAG_03260 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PH PH_9 Motif Other DBs NCBI-GeneID:  20704723 NCBI-ProteinID:  XP_009655420 UniProt:  G2WZ18 LinkDB All DBs Position 6 AA seq 1352 aa AA seqDB search MSQFSGRDTKSPSPNSSPPRNDSPFSNPDANNGNTNFNPKGAFTGKPGAPPPVTIPGSES APYPQPNPAYAQNYNHHRPATPTSPARSDYASSPANASPLNTGTPARGHKRNSSRPLSMV QTYQPPFMDVNEDTIPELQPIFTFLNSHANKLYQEGYFLKLDDQNTHGRPNPDRTWTECF AQLVGTVLSLWDAAELDAAGQDGEVLPKFINLTDASIKMIESLPTRTSDEQPLQNILSIS TAGRNRYLLHFNSHHSLIQWTAGIRLAMFEHSTLQEAYTGALIAGKGKTLNNINIVMERS KFKTEEWVRVRFGAGVPWRRCWCVISPPDEKEYQKAQKEMKKKSPYERSGPPVLKGDIKF YDTKVEGKKQKKAKPIASISDSYSAYAIYPQAKSLIDASTLLKIEGNITIHSDPPSSTEG FVFIMPEVHPMVSGFEMLLRFLFPTWDTFALYGRPGRLVASVLDPRSLMFAMPKHRRYGY LEILDVTGLILKDGSSGWSESQWRKQLKELTGTRMNTIEDTPSPRGHSRAGSRRSNRLSG GVPQPRARVGFADDSAITNRVSRSLSLTGAPRTDSAPPQVSGPHAPDPFRQEPQGGPYQA PPPASRGIMQGRTGTQDGQSSDDEQFARNIPPGTLDGVRNLQTPEPVSRPPAFNHGPQSR PLSKPYHSPELRRANSRLSNTTLSQLAKAGGVSIPTGGHPGPYPDPRSGENHAAAAQPSV HPDANIMGAYANDSGSREAMTSPNNFQPSQGGLPPPIPPLNQKRSRSPMAQQPFGGPPPS PGPRSPLPPNPPYGGRGGPDQQNRMPPPIRPPQAPYNNFSRPDGARSPTVGGPGHTQNLD IRGLGYGQTPPLTPNSPRVPPQYQDQRPRTPNDQGGRSPMPNVERSPPIHRKPIANRSDS LRQQEHPSMVPGGASGPMMHMGGPGPAQPTESGRKRTPQPDQQLQRQYSERSAASSHYDD ASVTSPDYASGRKSSDTQASVDRPRAGVLRTTGGEPPMPDMPHPQGFDIPDINFGPTINY GASPRKKTPTPINPGMQRPYSPALRSPAVASHEHGDAPPPRQVPWQPSVSGSAGNGSGLS AEQYVQQRAAQAGHVRTPSNPALNNMRAKTPSPSMGRRSSQELLNQHHRNNSSGDLMARP SSRGANHALDVGSSGEMASQLSARDQEQVARMTGAPLLGMGGGNRPQQQQQQAIGGGLVG AIDAREREKQQMKQGMNNHAVHHAMQQQQRQQYQQQQQQQFQPQMHQPMYGQQGMYPPQN MGRGGNYGPPRPQQGPGPYGGPMSQQQGGAYRPGPGPGPGPGPMPMRQGPPPPGDFMPPQ GPYAAGGRPQSPGGQYGRGQQGMRPPNQGHAL NT seq 4059 nt NT seq  +upstreamnt  +downstreamnt atgtcccagttttctggacgggacacaaaatcaccttcgcccaactcgtcgcccccgcgc aacgactctcccttctccaacccagacgccaacaacggcaacacaaacttcaaccctaaa ggtgccttcaccggcaaaccaggcgcaccgcctcccgtcaccataccaggctccgagtcc gcaccctacccccagccgaaccctgcctacgcccaaaactacaaccaccaccgccccgca acgcccacatcgcctgcccgctccgattatgcatcatcgcctgccaacgcctcaccctta aataccggaaccccagcacgcggccacaagcgcaacagttctcgcccgctgtccatggtc cagacctaccaaccgcccttcatggatgtcaacgaagacaccatcccggagctgcagccc atcttcaccttcctcaacagccacgccaacaagctgtaccaggagggctacttcctgaag ctcgatgaccagaacactcatggccgcccaaaccccgaccgaacgtggacagaatgcttc gcccagcttgtcggcaccgtcctgtcgctgtgggacgctgctgagctagacgctgcaggc caggatggcgaggtcctgcccaagttcatcaacctcaccgacgcttctattaagatgatc gagtctcttcccacaaggacgagcgacgagcaacctttgcagaacatcctcagtatttcc actgccggcaggaaccggtaccttctccacttcaactcacaccactcgctgattcaatgg acggccggtatccgcctcgccatgttcgagcactcgacgctgcaggaggcctacactggt gccctcattgccggcaaaggcaagacgctcaacaacatcaacattgtcatggaacgatcg aaattcaagacggaggaatgggtgcgagttcgttttggcgcaggcgtgccctggagacgt tgctggtgcgtcatctcgccgccagacgagaaggagtaccaaaaggcgcagaaggagatg aagaaaaagtcaccctacgagcgttccggaccgcccgtcctcaagggagacatcaagttc tatgacaccaaggtcgagggtaaaaagcagaagaaggccaagccgattgcctccatctcc gattcatactctgcctacgccatctatccccaggccaagtcgctcattgatgcctcgacg cttctgaagattgagggcaacattacgattcactccgacccgccctcgtctaccgaaggt ttcgtcttcatcatgcccgaggtgcatcccatggtcagtggcttcgagatgctgcttcgc ttcctgttccccacgtgggatacattcgccctctacggtcgcccaggcaggctggttgct agcgtgctagaccccagatcgctcatgttcgccatgccaaagcaccgccgatacggctat ctcgagatcctggacgtcaccggcctcattctcaaggatggcagctctggatggtcagag agccagtggcgcaagcagctcaaggaacttaccggaacacgcatgaacacgattgaagat accccgtcccctcgcggccacagccgtgctggcagccgaagaagcaaccgtctgagtggg ggtgtgcctcagccgagagcccgcgttggattcgcggatgactccgccatcacgaaccgt gtctctcgatctctctctctgacaggggctcctcgtacagattccgcgcctccccaggtc agcgggcctcacgcgccagatcctttccgccaggagcctcagggtggtccttaccaggca ccgccgcctgcttcccgtggcatcatgcagggccgaaccggcacccaggatggacagagc tcggatgatgagcagtttgcacgcaacataccacccggaactctggacggggtgagaaac cttcagaccccggagcccgtctcacgacctcctgcattcaaccacggacctcaatcaagg cctctcagcaaaccgtaccactcaccggagcttagaagggccaacagccgtctctcgaac acgacactatcacaactagccaaggccggcggcgtttcaatcccaacgggcggtcatcct ggcccgtaccccgaccccagaagcggtgagaaccacgctgctgcggcgcaaccatcggta catcctgacgccaacatcatgggagcctatgctaacgacagcgggtctcgcgaagctatg acatcgcccaacaattttcagccttcccagggaggtctccctcctccaatcccgcccctg aaccagaagagatcccggtctccgatggcgcaacagccttttggtggtcctcctccgagc cccggtcctcgcagccctctgcctcccaaccccccttatggtggccgaggtggcccggat cagcagaaccgcatgcccccgcccattcgccctccccaggctccctacaacaacttctcg cgacccgacggagcgcgaagccctacagttggcgggccaggtcacacgcagaatctcgac atcaggggtctcggctatggccagaccccgcctctcacccccaactcaccccgagtcccg ccccagtatcaggatcagcgtccccgcacccccaacgaccaaggcggtcgaagtcctatg cccaatgtggagagatcccctccgatccaccgcaaaccgattgccaaccgatccgacagt ctgcggcaacaggagcaccccagcatggttccgggtggcgcgtccggacccatgatgcac atgggcggtcctgggcctgcacagcctacggagtctggccgaaagcgaacccctcagccc gaccagcagcttcagcggcagtacagtgagcgcagtgcagccagcagtcactacgacgat gcctccgtcacgagccccgattacgccagcgggcgcaagtccagcgacacgcaggcttct gtcgatcgtcctcgtgctggtgtccttcgaacgacaggcggagagccccccatgcccgac atgcctcaccctcaaggattcgatatccctgacatcaactttgggccgacaatcaactac ggcgcgagccctcgcaagaagacccccacgcccatcaaccctggaatgcaacgcccatac tcgcctgctctgcgatctcccgctgtagcgtcccacgagcatggcgatgcgcccccacct cgccaggttccatggcagccgagcgtcagtggcagtgctggtaatggatcaggcctcagc gcagagcagtatgttcagcagcgggctgcccaggccgggcatgttcggacgccttccaac ccggcactgaacaacatgcgtgccaagacgccgtctccttcgatgggtcgtcggtcgtcg caagaactgctcaaccaacaccacaggaacaacagctcgggagatctcatggcgcgaccc agctctcgaggcgcgaaccacgctctcgatgtgggcagttcaggtgaaatggcgtcccag ctgtctgctcgggaccaggagcaggtggctcgcatgacaggggcaccattgcttggcatg ggtggtggtaacagaccgcagcagcagcagcaacaggctatcggaggcggtttggttggt gccattgacgcccgtgaacgcgagaagcagcagatgaaacagggcatgaacaaccatgcc gtccatcatgccatgcagcagcagcagcgacaacaataccagcagcagcagcagcagcaa tttcaaccgcagatgcatcagcctatgtatggtcaacagggcatgtacccgccccagaac atgggacgtggtggcaactacggaccaccccgtccacagcagggtcccggaccctacggc ggacctatgtcgcagcaacagggtggggcctaccgacctggtcctgggccggggccgggg ccggggccgatgcctatgcgccagggcccgcctcctcccggcgacttcatgccgccgcag ggcccgtacgccgctgggggtcgtcctcagtcgcctggtggccagtatgggcgcggtcag cagggaatgcgacccccgaaccaaggccacgccctctga

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