KEGG   Verticillium dahliae: VDAG_04254
Entry
VDAG_04254        CDS       T03450                                 
Name
(RefSeq) RNA-binding protein
  KO
K14407  cleavage stimulation factor subunit 2
Organism
vda  Verticillium dahliae
Pathway
vda03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    VDAG_04254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vda03019]
    VDAG_04254
Messenger RNA biogenesis [BR:vda03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     VDAG_04254
    U7-dependent histone pre-mRNA processing factors
     VDAG_04254
SSDB
Motif
Pfam: CSTF2_hinge RRM_1 CSTF_C RRM_7 Spo7_2_N
Other DBs
NCBI-GeneID: 20705717
NCBI-ProteinID: XP_009648996
UniProt: G2X1T0
LinkDB
Position
1
AA seq 306 aa
MSKTLSRVVFVGNIPYGLSEEQITDIFSSAGKVINFRLVYDRETGRPKGFGFAEYPDHDS
AASAVRNLNDYETMGRKLRVDFSNEGGTDDNDFNQGRDGLSFSAPNTYGQTAPAAPQAST
LPPLPPGKELPANITATDAISRTLNTLPPSQLLDILTQMKALASNDPARATELLQQAPQL
SYAVFQALLLMGLVSPEAIHSVLEPGSGVPAPQAPPAGFPPQGVPGYPPAGAINTPPVAA
TPYPAPPQPVYGAPAPAPAPAPALGHDTDALMRQVMELPIETINTLPEAERAQIMALRAQ
FQQQRR
NT seq 921 nt   +upstreamnt  +downstreamnt
atgtcgaagacgctttcccgcgttgtcttcgtaggcaacatcccttacggtctctccgaa
gaacaaatcaccgatattttcagcagcgctggcaaagttatcaacttccgtcttgtctac
gatcgcgaaacaggaagaccaaagggcttcggatttgccgaataccccgaccacgattct
gccgcttcagcagttcgaaacctgaatgattacgaaacgatgggtcgcaagttgagggtt
gacttctctaacgaagggggcaccgacgacaatgatttcaaccagggtcgcgatggtctc
agctttagtgctccaaacacctatggccaaacagcacctgccgctccacaagccagcaca
cttcctccgcttcctcctggcaaagaactgcccgccaacattaccgcgaccgacgccatc
tctcgcacgctcaacacgctccctccttcgcagcttcttgatattctgacacaaatgaaa
gctttggcttccaacgatccggcccgcgcaacagagcttcttcaacaggctccccagctg
tcctacgccgtcttccaggcccttctcctcatgggacttgtgtcaccagaggctattcac
agtgttctcgagcccggcagcggtgtaccagcgcctcaggctcctccggccggtttccca
ccgcagggtgtacccggatacccgcccgccggcgcgatcaacaccccgcctgttgcggcg
acaccgtatcctgcgccaccacagccagtgtacggcgcccccgcccccgctcccgcgcct
gcgcctgcgctgggtcatgacacagatgcactcatgaggcaggtcatggaactcccaatc
gaaacaatcaacactctgcctgaagcggagcgcgcccagatcatggcgctgcgcgcacaa
ttccagcagcagaggcgctag

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