Verticillium dahliae: VDAG_04254
Help
Entry
VDAG_04254 CDS
T03450
Name
(RefSeq) RNA-binding protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
vda
Verticillium dahliae
Pathway
vda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
VDAG_04254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vda03019
]
VDAG_04254
Messenger RNA biogenesis [BR:
vda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
VDAG_04254
U7-dependent histone pre-mRNA processing factors
VDAG_04254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
Spo7_2_N
Motif
Other DBs
NCBI-GeneID:
20705717
NCBI-ProteinID:
XP_009648996
UniProt:
G2X1T0
LinkDB
All DBs
Position
1
AA seq
306 aa
AA seq
DB search
MSKTLSRVVFVGNIPYGLSEEQITDIFSSAGKVINFRLVYDRETGRPKGFGFAEYPDHDS
AASAVRNLNDYETMGRKLRVDFSNEGGTDDNDFNQGRDGLSFSAPNTYGQTAPAAPQAST
LPPLPPGKELPANITATDAISRTLNTLPPSQLLDILTQMKALASNDPARATELLQQAPQL
SYAVFQALLLMGLVSPEAIHSVLEPGSGVPAPQAPPAGFPPQGVPGYPPAGAINTPPVAA
TPYPAPPQPVYGAPAPAPAPAPALGHDTDALMRQVMELPIETINTLPEAERAQIMALRAQ
FQQQRR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagacgctttcccgcgttgtcttcgtaggcaacatcccttacggtctctccgaa
gaacaaatcaccgatattttcagcagcgctggcaaagttatcaacttccgtcttgtctac
gatcgcgaaacaggaagaccaaagggcttcggatttgccgaataccccgaccacgattct
gccgcttcagcagttcgaaacctgaatgattacgaaacgatgggtcgcaagttgagggtt
gacttctctaacgaagggggcaccgacgacaatgatttcaaccagggtcgcgatggtctc
agctttagtgctccaaacacctatggccaaacagcacctgccgctccacaagccagcaca
cttcctccgcttcctcctggcaaagaactgcccgccaacattaccgcgaccgacgccatc
tctcgcacgctcaacacgctccctccttcgcagcttcttgatattctgacacaaatgaaa
gctttggcttccaacgatccggcccgcgcaacagagcttcttcaacaggctccccagctg
tcctacgccgtcttccaggcccttctcctcatgggacttgtgtcaccagaggctattcac
agtgttctcgagcccggcagcggtgtaccagcgcctcaggctcctccggccggtttccca
ccgcagggtgtacccggatacccgcccgccggcgcgatcaacaccccgcctgttgcggcg
acaccgtatcctgcgccaccacagccagtgtacggcgcccccgcccccgctcccgcgcct
gcgcctgcgctgggtcatgacacagatgcactcatgaggcaggtcatggaactcccaatc
gaaacaatcaacactctgcctgaagcggagcgcgcccagatcatggcgctgcgcgcacaa
ttccagcagcagaggcgctag
DBGET
integrated database retrieval system