KEGG   Verticillium dahliae: VDAG_05018
Entry
VDAG_05018        CDS       T03450                                 
Name
(RefSeq) hypothetical protein
  KO
K03135  transcription initiation factor TFIID subunit 11
Organism
vda  Verticillium dahliae
Pathway
vda03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    VDAG_05018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vda03021]
    VDAG_05018
Transcription machinery [BR:vda03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     VDAG_05018
SSDB
Motif
Pfam: TAFII28
Other DBs
NCBI-GeneID: 20706481
NCBI-ProteinID: XP_009653049
UniProt: G2X4D6
LinkDB
Position
4
AA seq 327 aa
MASPPYAQSPTAISPPYPAHTPLPVSKKRASDGGSQPSLKRRKASTLSVSSATHPLRQTS
FPPEARSPLARSPSVDTASHVSGSQVSAPAGPPKKKRGRKPKNRNPEGAPDAGTPTPSLV
SGRGGTAGGGADGQNGEDGNDDDDDNDMQMGLVGGETRTQEQKQEEIRLRAMLVECFDED
QMNRYENWRAAKLTDNVVKRVVNATVSQSVPPTVTLAIKSVSKYFIGELIEKAISVQGEW
MNATGEKQSEVEFPPQNTDPTVRGDINRLSEKDKRGPLRPEHLREAWRQYKMSGESGWVG
TQGLWHEQQSDGVERFPVRTGGKRIFK
NT seq 984 nt   +upstreamnt  +downstreamnt
atggcttcacccccctacgcccagtcgcccacggccatctcccctccctatcccgcccac
acgccactgcccgtctcaaagaagcgcgcctccgacggcggctcccaaccctctctcaag
cggcgcaaggcctcgactctctccgtctcctcggcgacccaccccctccgccagacctcc
ttcccgcccgaggcgcgatcaccactcgcgcgctccccctcggtcgacacagccagtcac
gtcagcggcagccaagtcagcgcgccagcaggacccccgaagaagaagcgcggccgcaag
cccaagaatcgaaaccccgaaggcgcccccgacgcgggcactcccacgccctcgctcgtc
agcggacgcggcgggacggcgggcggcggtgccgatgggcagaatggcgaggacggcaac
gatgacgatgatgataacgacatgcagatggggctcgtgggcggtgagacgaggacgcag
gagcagaagcaggaggagatcaggctgcgtgccatgcttgtcgagtgcttcgacgaggat
cagatgaaccgttatgagaactggcgcgcggccaaactgaccgacaatgtcgtcaagagg
gtcgtcaacgccaccgtctcgcagtcggtgccgcctaccgtcacgctggccatcaaatcc
gtgtcgaaatacttcatcggcgaactcatcgagaaggccatcagcgtgcagggcgagtgg
atgaacgcgaccggcgagaagcagtcagaggtcgagtttcccccgcaaaacacggatccc
accgtgcgcggcgacatcaaccgcctcagcgagaaggacaagcgcgggcccctgcgcccg
gagcacctgcgcgaggcgtggcggcagtacaaaatgtcgggcgagagcgggtgggtgggc
acgcaggggctgtggcacgagcagcagagcgacggtgtcgagcgatttcccgtgcggacc
ggcggcaagcgcatcttcaagtga

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