Verticillium dahliae: VDAG_06770
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Entry
VDAG_06770 CDS
T03450
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
vda
Verticillium dahliae
Pathway
vda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
VDAG_06770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vda03021
]
VDAG_06770
03019 Messenger RNA biogenesis [BR:
vda03019
]
VDAG_06770
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
VDAG_06770
Messenger RNA biogenesis [BR:
vda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
VDAG_06770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
VHS
Motif
Other DBs
NCBI-GeneID:
20708233
NCBI-ProteinID:
XP_009657769
UniProt:
G2X9D8
LinkDB
All DBs
Position
8
AA seq
499 aa
AA seq
DB search
MSHNEQSGADVAEDYKQALEDLNSTNRADISTLTTIARENTEHAQIITDILQRHIIKAPA
HKKLPAIYVLDSIVKNVGTPYTLFFGAQLFQTFMEAYAAVDGHVRRKMEETLQTWKQPVP
QSLDDRPVFPPEVTKPIEESLNKARNSALALQAQGRGHPVGRARGAGIHRATPTPPGMRP
GSSQPGYPGPPPHAQQQQLNGSRPPSVQQQQAPAPYPPPQAYGGLQPTAGAPTPFQASPS
QHNSVNIAVLKHDIQELITASTLEAAQYPHDGVIKARLQGLHDLQRLLQTQDMPQDHLIL
IKNQVADLALKVRPQSVPSSAPIAAATPVSYHPPPPAPVAHIAPQPASVTLDSLLGQGAL
ASLLARQSATPQAQTPAPAPPPYAGMPIRSPQPPVAVPSRQPSAAPTPDPMALLAGLRMA
GLLGGTPTTTPPVPTPIPNLPHPGLPLPSLGGVPPPPPPGGIPPPGAGIIPPNIASLLSG
SNLPLSVRMMDQYSSIQRH
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacaacgaacagtcgggggccgacgtggcggaggactacaagcaggctttggag
gatctgaactcaaccaacagggccgacatcagcacgttgacgaccattgcacgagagaat
accgagcacgcccagatcatcacagatattctccagaggcatatcattaaagcaccggcg
cacaagaagctgcctgctatatatgtgctcgattcaatcgttaaaaacgtcggcacaccc
tacactctattctttggagctcagcttttccagacctttatggaggcctatgctgctgtg
gacggccatgtccgtcgcaagatggaggagacactgcagacgtggaagcaacctgtgcct
cagtcgctcgacgacaggcctgtgttcccgccagaagtcacgaagccgattgaggaatcg
ttgaacaaagcgcggaattcagctttggctctccaggcgcaaggtcgtggacaccccgtg
ggtagagcccgtggcgcaggaattcatagggcaacgccgacaccacccggcatgaggcca
ggatcgagccagcccggatatcctggcccgccacctcatgcacaacagcaacagctcaac
ggtagccggccacctagcgttcaacaacagcaggcaccggcaccctatcccccaccacag
gcatatggcggcctccagcctactgctggtgcccccacaccgttccaggcgtcgccgtcg
cagcataattccgtgaacattgccgtgttgaagcatgacatccaggagctcatcaccgcc
tccacgttggaagcggcgcagtatccgcacgatggggttattaaggcgaggctgcagggg
ttgcatgatttacaaaggttgcttcaaacccaggacatgccgcaggatcatttgatcctc
attaaaaatcaagtagccgatctcgctttaaaagtgaggccacagtcggtcccaagctct
gcccctattgctgctgctacgcccgtatcataccacccaccgccgcctgcacccgtggcg
catatagcgccgcagccagcctcagtcacacttgattctctgcttggccagggcgcgctg
gcgagtctcttggctcgacagtctgcgacgccgcaggcgcaaacgccggcgccagctccg
ccgccttacgccggcatgccgattcgatcgcctcagccgcccgtggccgtgccgtcacga
cagcctagcgcggcaccgaccccggatccgatggcgttgctcgccggtctgcgcatggcc
ggtctcctgggcggcacgcctacgactacaccgccggtaccgacaccaatacccaacctg
ccacatcctgggctgcctctgccatcgctcgggggtgtccctcctccaccacccccggga
gggataccgccgccaggggccggcatcatacctccaaacatcgcgagtttgcttagcggc
agtaatcttccgctgtccgtgcgtatgatggaccaatacagctcaattcaacgtcactaa
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integrated database retrieval system
