Verticillium dahliae: VDAG_07730 Help Entry VDAG_07730        CDS       T03450                                  Name (RefSeq) ubiquitin conjugation factor E4   KO K10597   ubiquitin conjugation factor E4 B [EC:2.3.2.27] Organism vda  Verticillium dahliae Pathway vda04120   Ubiquitin mediated proteolysis vda04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:vda00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     VDAG_07730    04120 Ubiquitin mediated proteolysis     VDAG_07730  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:vda04121]     VDAG_07730 Enzymes [BR:vda01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      VDAG_07730 Ubiquitin system [BR:vda04121]  Ubiquitin ligases (E3)   U-box type E3    VDAG_07730 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Ufd2P_core U-box FAD_SOX Motif Other DBs NCBI-GeneID:  20709193 NCBI-ProteinID:  XP_009654930 UniProt:  G2XC48 LinkDB All DBs Position 5 AA seq 1102 aa AA seqDB search MDPSQDPSQLPAATPDAPDRNTMEQIRLRRLAKLGTASPKPSEESGSSTKPEGSSTTPSA PTPEQRASPAAQASEKRKINVTPTPADKPPVSSSQSSTIPDRSHKRAAAKIDDRPQATQP ATKKPNMAPEESIDDYTHRTVSSLFRITLNPSQTDDGHGHQTTFLPGVASELAEVGAPAK FTVAVLDTTLLEAATAQPHATPLLRYLLPCWKRVSRTLALLKHDEKQKREVLEEAKRLCM SYCLFALTIPDLFGRPQPDDLATFLLRSQEHEDSISIDFTKDVISRFPEDEQYPAVFADA MAVISVKLSDMSMESDYRPYLNALSFYAKFPPLLRAVSEHETFLSATTGPEVERKTILGP FFRLSPLQSEVSLTYFPNPRSLDKGRAAQSQDALRAILRVYQDELFAIANAFIRSDSDTR NRMLDWCALGVNTNHKRRAIQVDPREVSSDGFMVNLTVILDRFCSPFMDTTFSKVDRIEV DYFRRNPRVSIKDETKINADQAASDAFYANADSKSSNFISEVFFLALAAHHYGSGATNSK LKSLDRDIKFYEKHITAMEAERYKLANVSVRNPTLNGVIANDNENPARLAMFEVSLKRHT DVLEKAIASKNAIEGVFLDDKMQELSLRFMKYVAVWMLRLASQSAYTPEKDLALPLPSPQ PEAFACLPEYALQDVVDNFKFVYRYLPQIMPSAVGSEMIALCIAFLQSSEFIKNPYLKSS LVTLLFSGTWPFSHFKKGVLGDQLYGSKFANKHLLRALMKFYIEAESTGAHTQFYDKFNI RYEIFQVIKCVWGNDVYREQLARESKVNRQFFVQFVNLLLNDATYVLDEALTKFPKIHQL QAELEQNPGMTPEDREKKLEELQTLEGQAGSYMQLANETLAMMKLFTSALADAFTMPEIV QRLASMLNYNLETLAGPKMGQLKVNDPSKYHFQPRVLLSDFVDIYLNLANSQAFIDAVAA DGRSYKPETFDKAGFILMKRHMKDDVELRRFDALKNSFKESKAIADQAELDLGEIPADFE DPILGDLMKDPVMLPSQHVVDRSTIMQHLLSDPKDPFTRQPMTIEDVVPDQALRERIEAW KAEKIEAAKAKVLGDSMDTTEG NT seq 3309 nt NT seq  +upstreamnt  +downstreamnt atggacccctcacaggatcccagccagctcccggcagccacaccggatgctccagaccgc aacaccatggaacaaatccgcctgaggcggcttgccaaattaggcacagcttcaccgaaa ccctccgaagaaagcggctcctccactaagccagagggctcgtccacaactccgtcagca ccgactcccgaacaacgcgcatcgccggcagcccaggcgagcgagaagcgcaagatcaac gtgacgccaacaccagcagacaaaccgccagtctcttcctcccagtcctcgaccatcccg gaccgatcgcataagcgggccgccgcgaagattgatgaccgcccacaggctacgcagccg gcaaccaaaaagcccaatatggcgcccgaggagtctatcgatgactatacccaccgcacc gtcagctcgttattccgaatcaccttgaatcccagtcaaacggatgacggccacggccac caaaccacattcctgccaggcgtagcctccgaacttgccgaggtcggtgcgcccgccaag ttcaccgtggcagtcctcgatacgacattgttggaggcagctacggcgcaaccgcacgcg acaccacttcttcggtacttgctaccatgctggaagagggtcagtcgaactctggccttg ctcaagcatgacgagaagcagaagagagaggttttggaggaggcgaagagactctgtatg agctactgtctctttgcgctgacgattcctgatctgttcgggcgaccccagcctgacgac cttgcaacatttctcctcagaagccaagaacatgaggattccatctccatcgactttacc aaggacgtcatttcccgatttccggaggacgagcagtaccccgccgtgtttgcagatgca atggctgtcatcagcgtgaagctgtctgatatgagcatggagtctgattaccggccctac ttgaacgccttgtccttttatgcaaaattccctcctctgctaagggcggtctccgaacac gaaacgtttctgtcagccaccactggcccagaagtggagaggaagaccatactcggccct ttcttccgactgtcgccgcttcagtccgaagtcagcctgacatacttcccgaaccctcgc tcactcgacaaggggagggcggcgcagtcacaagatgctcttcgtgccattctgcgggta taccaggatgagcttttcgcgattgccaacgccttcattcgttctgactctgacacgaga aaccgcatgctcgactggtgcgctctcggcgtcaatactaaccacaagcgaagagctatc caggttgatcctcgggaggtctcttcagacggcttcatggtcaacttaactgttattctc gaccgcttctgctcgcccttcatggacacaaccttttccaaggttgacaggatcgaggtc gactacttcaggcgcaaccctagggtaagcatcaaggacgagaccaagattaacgccgac caagccgcctcagatgccttctacgccaacgcagattctaagagctccaattttatatcc gaggtttttttcctggccctggctgcccatcactacggcagcggcgcgaccaactcgaag ctgaaatcattggaccgagacataaagttctacgaaaagcatatcacggccatggaggca gagcgatacaaattggctaatgtgagtgtgcgaaaccccactttgaacggtgtcattgct aatgataacgagaaccctgctcgacttgccatgttcgaagtcagcctcaagaggcataca gatgtgttggagaaggcaatagcgtccaagaacgctattgagggtgtttttctcgacgat aagatgcaagaactgtccttgcgattcatgaagtatgtggcggtttggatgctgcgtctt gccagccaatcagcctatacgccggagaaggatctagcactccccttgccttcgccccag ccggaggcgtttgcgtgtctgcccgaatatgctctacaagatgtggtagacaactttaaa ttcgtataccgatacctgcctcaaattatgccgtcagctgtcggcagcgaaatgattgct ctctgcattgcattcctgcaatcatcagagttcatcaagaacccatatctcaagtcctcc ttagtcacgcttctcttttccggaacctggccgttctctcacttcaagaaaggtgttctc ggcgaccagctgtacggctcaaaattcgccaacaagcatcttctccgggcgctgatgaag ttttacatcgaggccgagtccacaggtgcacacacgcagttctatgacaagttcaacatc cggtacgagattttccaggtcatcaagtgtgtctggggcaacgacgtgtacagggagcag cttgcacgcgagagcaaggtcaaccgacagttttttgttcaattcgtcaacttgcttctc aatgatgccacctatgtgcttgacgaagccttgaccaagttccccaagattcatcagctg caagctgagctcgaacagaatcccggcatgacgcctgaagatcgcgaaaagaagctcgag gagcttcagactctggaaggtcaggccggatcctatatgcagctggccaatgagaccctg gccatgatgaagctcttcacttcggcccttgccgatgctttcacaatgccagagattgtc cagcggttagcgagcatgctcaactacaacctcgagacgctggcgggccccaagatgggc caattgaaggttaatgatccttccaaataccactttcagccgcgagtgctgctgtccgac tttgtcgacatttacctcaaccttgccaactcgcaggccttcatcgacgccgtcgccgcc gacggacgctcgtacaagcctgaaacctttgacaaggcaggattcattctgatgaagcgc cacatgaaggacgatgtcgagctgagaaggtttgatgccctcaagaacagcttcaaggag tccaaggccattgccgaccaggcagaactggatctcggcgagatccctgcagactttgag gaccccatccttggcgacctgatgaaggacccggtcatgctgccttcgcagcatgtcgtc gatcgttcgaccatcatgcagcaccttctgtctgaccccaaggacccctttacacgtcag ccaatgacgatcgaggacgtggtgcctgaccaggctctgcgggagaggattgaagcctgg aaggcggagaagattgaggccgccaaggccaaggttttgggcgactctatggatacaacg gaaggataa

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