Verticillium dahliae: VDAG_08777
Help
Entry
VDAG_08777 CDS
T03450
Name
(RefSeq) pre-mRNA-processing protein prp40
KO
K12821
pre-mRNA-processing factor 40
Organism
vda
Verticillium dahliae
Pathway
vda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VDAG_08777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vda03041
]
VDAG_08777
Spliceosome [BR:
vda03041
]
Complex A
U1 snRNP components
U1 related factors
VDAG_08777
Complex B
VDAG_08777
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Glyco_hyd_101C
GRP
Motif
Other DBs
NCBI-GeneID:
20710240
NCBI-ProteinID:
XP_009649389
UniProt:
G2XF45
LinkDB
All DBs
Position
1
AA seq
839 aa
AA seq
DB search
MNGVGSSFGQPAQWQEHRTEDGRVYYYNAATKVTQWTKPEDMMTAAERALANQPWKEYTA
EGGRKYWYNTETKQSSWEMPEAYKQASGATDTPVPPAAAPYNGGDRYSGGGDRYNGGGDR
HNGGDRHNGGDRHNGGDRYAGHDRYRDDRDALPESRQLTYNSDPAAKAFVPASNDPDYAT
FEEAEAAFLKLLKRSGVQPDWNWEQTLRTIAKDPQYRAIKDPKDRKAAFEKYCHDMIVHD
KERAKERLTKLRADFETMLKRHPEIKHYTRWKTARPMIEGETIFRSTDNETERRQLFEEY
IIELKKVHVDHQTSSRKTAMDGLIDLLPKLNLEPYTRWADAQGIISSTPPFQNDERYKTL
SQFDVLTAFQNHMKALERTFNDSKQEQKNQKFRRERKARDAFLDLLNELRRQGKINAATK
WQKFHPLIENEERYRAMAGQPGSTPQELFWDIVEEEERALRGPRVDVLDVLDDERFEVTP
KTTFDEFLAVVKKNRRTANINNDTLTILFERLQERRSKRPEDDKHSERQQRRAVDDLRTH
MKRVEPPIAVGDTWEKVRPRLADSPAFQAVASEEARVGAFDKFVRRLREKEEDADLDRRR
RRDRGSSERDLYRDRDTHRERDRSRGERSYRGGGGRASRRSRSPEVDAYEADRRKAIAER
KRNHRKSTMAESLLSDRRASPPPPPPRRERSRERNGGRDRERERERERDRDYDRPSRSRR
DDDAYYDRDRRDREDERERTYRRRIDSYDELPYGDERPSGSRRRRDDDDADRRDSRDSKR
VKREKTPRERETTPPRDVKTKSPLPPTATTAAAVTGKKEAKEDDAGVHSGSEEGEIEED
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcgtggggagctcgttcgggcaacctgcgcaatggcaggagcatcggaccgag
gatggtcgagtctactattacaatgctgccaccaaggtcacccagtggaccaagcccgag
gatatgatgacggctgccgagcgcgctctggcgaaccagccatggaaggaatacacggct
gagggtggccgcaagtactggtacaacaccgagacgaagcagagctcatgggagatgccc
gaggcctacaagcaagcctctggcgccaccgacacccccgtgcccccggctgccgctcct
tacaacggcggagatcgatacagtggaggaggcgacaggtacaacggtggtggagacaga
cacaacggcggggacagacacaacggcggtgacaggcacaacggcggtgacagatacgcg
ggccacgaccgctaccgcgacgaccgagacgctctccccgagtcgcgccagctgacctac
aacagcgaccctgctgccaaagcattcgtccccgccagcaacgaccccgactacgccacc
tttgaggaggccgaagccgccttcctcaagctgctgaagcgcagcggtgtccagcctgac
tggaactgggagcagacgctgcgaacaatcgccaaggatccccaataccgcgccatcaag
gatcccaaggatcgcaaggccgcgttcgagaagtactgccatgacatgattgtgcacgac
aaggagcgtgccaaggagaggctgaccaagctgcgtgccgatttcgagaccatgctgaag
aggcatcccgagatcaagcactacacccgctggaagacggcgcggcccatgatcgagggc
gagaccatcttccgctcgaccgacaatgagacggaacgccgccagctgttcgaggaatac
atcattgagctcaagaaggtccacgtcgaccaccagacgtcgtcgcgcaagacggccatg
gacgggctcattgacctgctgcccaagctgaacctcgagccctacacgcgctgggcggac
gcccaaggtatcatctcctccaccccgcctttccagaacgacgagaggtacaagactctc
agccagtttgacgtcctgaccgcgttccaaaaccatatgaaggccctcgaacgcaccttc
aatgactcgaagcaggagcagaagaaccaaaagttccgcagggagcgcaaggcccgtgat
gccttcctggaccttctcaacgagctcagaaggcagggtaagatcaatgccgcgaccaag
tggcaaaagttccaccctctgatcgaaaatgaggagcgctaccgtgccatggctggccaa
cccggctctacgccgcaggagctcttctgggacattgtcgaggaggaggagagagcactg
cgcggccctagggtcgacgtgctcgatgtcctcgatgatgagcggtttgaggtgactccc
aagacaacctttgacgagttccttgctgttgtcaagaagaaccgacgcactgctaacatt
aacaacgataccctcaccatcttgtttgaacgcctccaggaacgccgatccaagcggcca
gaggatgacaagcactccgagcgccaacaacgccgagcggtagacgacctgcgcacgcat
atgaagcgcgtggaacctcccattgccgtcggcgatacatgggagaaggttcgcccgcgt
cttgcggatagcccggctttccaggccgtcgcctccgaggaggccagagtcggtgccttt
gacaagtttgtccgccgactacgcgagaaggaggaggacgccgaccttgaccgccgcagg
cgccgtgatcgtggctcgagtgagcgcgacctgtaccgcgatcgcgacactcatcgcgag
agagaccgttcgagaggtgagaggtcctaccgtggtgggggaggccgagcttccaggcgc
agccgcagccccgaagtggacgcctacgaagccgacagacgtaaagccatcgccgagcgc
aagcgcaaccaccgcaagtcaaccatggccgagagcctgctgtcggaccgtcgcgcctcg
ccgccgccgccgcctccccgtcgtgagcgttcgcgcgaacgcaacggcggtcgcgaccgt
gagcgagagcgtgaacgggagcgagaccgagactacgatcgccccagccgatcccgccgc
gacgacgacgcatattacgaccgcgaccgacgtgacagggaggacgagcgcgaacgtacc
taccgccgacgcatcgattcatatgacgaacttccttatggagatgagcgtccttctgga
tcccgccgccgccgagacgacgatgatgccgacagacgggattccagagactccaagcga
gtcaagcgtgagaagacaccccgcgagcgcgagaccacccctcctcgcgacgtcaagact
aagtccccccttcccccgaccgccactaccgctgctgctgtgacgggtaagaaagaagcc
aaggaagatgacgccggcgttcattctgggtccgaggaaggcgagattgaggaggattag
DBGET
integrated database retrieval system
