Varroa destructor (honeybee mite): 111243516
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Entry
111243516 CDS
T07383
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111243516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vde03000
]
111243516
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
vde03310
]
111243516
Transcription factors [BR:
vde03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
111243516
Nuclear receptors [BR:
vde03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
111243516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111243516
NCBI-ProteinID:
XP_022644943
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MYKKDRPKVPVTALLQGAGVATMGSVTALGPGGVICPLPVSSPSALSAPTSPEASQTSWT
SGQAVPGGGVPLQAISATRQVGVGVGVGVGVGAPGASSSPPAQLTSANPNSQQLNNSSTS
VQPNNTSFTFISQPATPTGSGGVALSPGGSGPTPPPAMSGAITPTTPTGTPSNSNYPPNH
PLSNSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREERRCLIDKRQRNR
CQYCRYQKCLQCGMKREAVQEERQRKDRSESNNNNDMIDAHQVNGVGGGGGGGGGGGGGG
GGGGNIATNVSGGGVNRSPHVVNALYQQQAAVLEMMPIERITDAELRVDQRPNEVELHLL
TSQDPVTSMNTAADRQIHQLVAWARMIPHFTQLPPQEQATLLKCGWNELLIAGFSHKSIH
VKDGIVLATGLVVQRDSAHQAGVGLIFDRVLAELVTKMRDMKMDKTELGCLRAIILYNPE
ARGLKDRHLVQQFREGVYIALEEYTRMTYPDQPSRFPKLLLRLPALRSIGLKCVDHLFFL
KPRDETTIDLFLQQMLESIDL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaaggatcggccaaaagtgccagtaacagcgctactgcagggagccggagtc
gcaacgatgggatccgtcacggcgttgggtcccggaggcgtaatttgtcctttacccgtc
tcgtcaccatctgcactaagtgctcccacctcaccggaagcatcgcaaaccagttggaca
agtggccaagctgtacccggcggtggcgtcccccttcaggcgatttctgcgacgcgccaa
gttggcgtcggcgtgggcgtgggtgtgggcgtgggtgcacctggcgcctcatcctctcct
cctgcgcagctcacctcagcaaatcccaattcccagcagttaaacaacagttccacaagc
gtccagccgaacaatacgagttttacttttatcagccaaccagcaacgccaacgggcagc
ggaggggtcgccctttcacctgggggttccggtccgacgccgccacccgcaatgagcggc
gccatcacacccacgacgcccacaggaacacctagcaactctaattatcctccaaaccat
cccctgtctaattccaagcatctctgctcaatctgcggggatagggcatctggcaagcac
tatggcgtctacagttgtgaaggatgtaaaggtttcttcaagaggaccgttcgtaaagat
ctaacgtatgcgtgtcgcgaagagcgacgatgtttgatcgacaagcgacaaaggaatcgc
tgccagtactgtcgctatcagaaatgcctccaatgtggtatgaaacgcgaagcggttcaa
gaagaacgccaacgaaaggatcgatccgaaagcaacaacaacaacgacatgatagacgcc
catcaggtgaatggggtgggaggcggcggcggcggcggcggcggtggcggtggcggcggc
ggtggcggaggcaacattgcgaccaatgttagtggtggaggcgttaaccgctcaccgcac
gtggtcaacgcgctttaccaacaacaggccgcagtattggagatgatgccgatcgaacgt
attaccgatgctgaactgcgggtcgaccaaagaccgaacgaggtcgaattgcatctgcta
acgtcgcaggatccagtgacgtcaatgaacacggctgctgatcgccaaatccaccaattg
gtagcatgggcccgaatgataccacatttcacacagttaccccctcaagagcaagcaacg
ttgctgaagtgcggctggaacgaattgctcatagcgggattctctcataaatcgatacat
gtcaaggatggaatcgtgttggccaccgggcttgttgtacagcgagatagtgcccatcag
gcgggcgtgggactgatttttgacagagtacttgccgaactagtaacgaagatgcgtgat
atgaagatggataagacggaactgggctgtcttcgcgcgattattctgtacaacccagaa
gcgcgaggtttaaaagaccgacatcttgtccagcaatttcgggagggcgtctatatcgca
cttgaggagtatacccgaatgacctatccagatcagcctagccgtttcccaaagctgttg
ttacggctaccagccttacgttcgattggactgaagtgcgtcgaccacttattctttctt
aaaccccgcgacgagaccaccatcgatttgtttctacagcagatgctcgagagtatcgat
ctctaa
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