Vibrio sp. EJY3: VEJY3_12335
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Entry
VEJY3_12335 CDS
T01683
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vej
Vibrio sp. EJY3
Pathway
vej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VEJY3_12335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vej03400
]
VEJY3_12335
Enzymes [BR:
vej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VEJY3_12335
DNA repair and recombination proteins [BR:
vej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VEJY3_12335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
SH3_13
UvrD_C_2
RecD_N
Helicase_RecD
AAA_11
SLFN-g3_helicase
UvrD-helicase
Viral_helicase1
AAA_22
nSTAND3
AAA_16
UvrD_C
CbiA
DEAD
AAA_28
ResIII
T2SSE
TrwB_AAD_bind
MukB
DUF87
Herpes_Helicase
NTPase_1
AAA_7
SRP54
AAA
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AEX22943
LinkDB
All DBs
Position
1:complement(2733548..2735707)
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AA seq
719 aa
AA seq
DB search
MTTNNNLPSHQESLLATLERLAHKGAIRQLDYQFARFLYAQTDDAQSESQSDGQALAFIA
GVVSSELGKGHICLPLFDAQGQPTDLASKLGLFGEAALTLNTQLQGINWPQLLENSSLVG
AQGEALPLMFDGERLYLHRYWHYEVTLAEKLNQLGAAVSLQPQEFTRLSELLNHLFARQY
HFLFNAIAKATEAGSSTQVLRQQLVCDHLDVVASDALDWPAIDELLRQANKVQDLQPLDD
LVPLSACVNWQKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALIEQAAQEKNLTIKLV
APTGKAAARLTESIGKAVQELPVSPELKAKIPTESSTLHRLLGAIPNSAEFRHNKQNPLH
LDILVIDEASMVDLPMMYKVVDALPKHARLILLGDKDQLASVEAGAVLGDICSFHALGYG
KEQASAIAKLTGFDTLAHSSNSASSIADSLCMLQKSYRFDARSGIGQLAKAVNLGSAASV
DNVWARDFSDIEHFALSSQNYNQMMQTLVQEYGRYLKRIGQQEQDPNTGEPETLTRKAKV
VLDTFNQCRLLCAIREGDFGVAGLNQRIEKALAARKLIKVQDEIWYHGRPVMVTRNDHGL
GLYNGDIGICMRDDSEEEQRLKVFFELPDGSVKSVLPSRVPEHETAYAMTIHKSQGSEFD
YTLMILPPDFSPILTRELIYTGITRAKKRLALYAELNVLKRGIKVKTTRASGLVQRLAN
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaataacaatcttccatcgcaccaagagagcctgctggcaacacttgaacgg
ttagcacacaaaggtgcgattcgtcagctcgactaccaattcgcacgttttctttatgct
caaactgatgatgcgcagagtgaatcacaatcagacggtcaggcgctggcctttatcgct
ggtgtcgtcagtagtgagcttggtaaaggacatatctgtttgcctctcttcgatgcgcaa
ggtcagccgactgatttggccagtaagttggggctgttcggtgaggcagcgttaacgctt
aatactcaactgcaaggtattaattggccacaattattggaaaattccagtttggttggc
gcacagggagaagcgctgccgctgatgttcgatggtgagcgtttgtatttacatcgttac
tggcactatgaagtgacactggcggaaaagctcaatcaactgggcgcggcggttagcttg
caaccgcaagaatttacgcgattatctgagctgcttaaccatctgtttgcgcgtcaatat
cactttctttttaacgcgattgccaaagccactgaagctgggagtagcacccaagttctg
cgtcagcaattggtgtgtgaccaccttgatgttgtcgcaagcgacgcattggattggcca
gcgattgatgaacttttacgccaagccaataaagttcaggacttacaacctctggatgac
ctcgtgccactttctgcttgtgtaaactggcaaaaagtcgcggccgcagtcgcgctaacc
cgtcgatttgcagtgatttctggtggaccgggcaccggtaaaacgactacggtaaccaaa
ttgcttgctgcgctgatagagcaggccgcacaagagaagaatttaaccatcaagctggtg
gctccgacgggtaaagcggctgcacgattaaccgaatcaattggcaaagcagtgcaagag
ttaccggtttctcctgagttaaaagccaaaatcccgactgaatcgagcaccttgcaccgc
ttgttgggcgcgatccctaatagcgcagagttccgtcataacaaacagaatccgctgcat
ctggatatcttagtgattgatgaagcgtcgatggtcgatttacccatgatgtacaaagtg
gtcgatgcattgcctaagcatgcacgactgatcctgcttggtgataaagatcagctcgcc
tcggtagaagcgggggcagtgttgggtgatatttgctcgttccatgctttgggttatggc
aaagagcaggcttcggccatcgcaaagctgaccggttttgacaccttggcccacagtagc
aacagtgcgtccagtattgcggacagtctgtgtatgctgcaaaagagttaccggtttgat
gcacgatctggcattggtcaattagcaaaagcggtgaacttgggttctgcggccagtgtg
gacaatgtctgggcgcgagacttttcagatatcgaacattttgctctgagtagccaaaac
tacaatcagatgatgcagacgttggtacaagagtacggtcgttatctgaagcgtattggg
cagcaagagcaggatccaaatacgggagaacctgaaacgttaacccgaaaagccaaagtg
gtgttagacacatttaaccagtgcagactgctttgtgcgatccgcgaaggtgactttggt
gtggctgggttaaaccagcgcatagagaaagcacttgcagcgcgtaagctgattaaggtg
caggatgagatttggtatcacggcagacctgtgatggttacgcgcaatgatcacggttta
ggtttgtataacggtgatattggtatttgtatgcgggatgacagcgaagaagagcagcgt
ttgaaagtctttttcgaactccctgatggtagtgttaagtcggtactgccaagccgagtg
ccagagcatgaaacggcctacgccatgacaattcataaatcgcagggcagtgagtttgat
tacaccttaatgattctgccgccagattttagcccgatattaacccgtgagctgatttac
acaggcatcacccgagcgaagaaacgtttagcgctttacgcggagctgaatgtgcttaaa
cgaggaataaaggtgaaaacaacgcgagccagtggattggtgcagcgactagccaactag
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